RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SLC9A4Q6AI14 798 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 MSANTD2Q6P1R3 559 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 DNAJB7Q7Z6W7 309 aaPredicted RBP17.94■□□□□ 0.46
CLDN4-201ENST00000340958 ELMOD1Q8N336 334 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 CCDC89Q8N998 374 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 SPPL3Q8TCT6 385 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 HNRNPLLQ8WVV9 542 aaKnown RBP17.94■□□□□ 0.46
CLDN4-201ENST00000340958 TMEM121Q9BTD3 319 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 CCSER2Q9H7U1 834 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 ANLNQ9NQW6 1124 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 ARHGEF38Q9NXL2 777 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 DRG1Q9Y295 367 aaKnown RBP17.94■□□□□ 0.46
CLDN4-201ENST00000340958 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 SLC34A2O95436 690 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 GLUD1P00367 558 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 RB1P06400 928 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 SRGAP2BP0DMP2 458 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 RBP3P10745 1247 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 TNFRSF8P28908 595 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 ATP5C1P36542 298 aaKnown RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 ADCY8P40145 1251 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 VPS41P49754 854 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 CALCOCO2Q13137 446 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 TRADDQ15628 312 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 HECTD3Q5T447 861 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 RWDD4Q6NW29 188 aaKnown RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 MRPL43Q8N983 215 aaKnown RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 GDPD5Q8WTR4 605 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 NKD2Q969F2 451 aaPredicted RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 PRDM16Q9HAZ2 1276 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 C2orf71A6NGG8 1288 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 HIDE1A8MVS5 230 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 PAGE1O75459 146 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 KRT14P02533 472 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 ITGAVP06756 1048 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 FOSL2P15408 326 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 HMGA1P17096 107 aaKnown RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 KPNA1P52294 538 aaPredicted RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 ZNF135P52742 658 aaPredicted RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 PDZD4Q76G19 769 aaPredicted RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 BZW1Q7L1Q6 419 aaKnown RBP17.93■□□□□ 0.46
CLDN4-201ENST00000340958 KREMEN2Q8NCW0 462 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 SLC35B2Q8TB61 432 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 CCHCR1Q8TD31 782 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 HAPLN3Q96S86 360 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 ARHGEF4Q9NR80 690 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 DNMT3LQ9UJW3 386 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 SNX10Q9Y5X0 201 aa17.93■□□□□ 0.46
CLDN4-201ENST00000340958 PRRC2BQ5JSZ5 2229 aaKnown RBP17.92■□□□□ 0.46
CLDN4-201ENST00000340958 ZNF840PA6NDX5 716 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 C5orf67F2Z3F1 127 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 FAM72CH0Y354 149 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 MAP3K6O95382 1288 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 C8AP07357 584 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 ZDHHC11BP0C7U3 371 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 MYBL2P10244 700 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 DNAJB1P25685 340 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 EPHB2P29323 1055 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 GGCXP38435 758 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 PPP3CCP48454 512 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 NR2C2P49116 596 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 PTK6Q13882 451 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 NOMO1Q15155 1222 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 TRIP4Q15650 581 aaPredicted RBP17.92■□□□□ 0.46
CLDN4-201ENST00000340958 FAM72AQ5TYM5 149 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 DUPD1Q68J44 220 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 FAM72DQ6L9T8 149 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 FAM72BQ86X60 149 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 ALLCQ8N6M5 410 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 ATP6V0D2Q8N8Y2 350 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 PSMG2Q969U7 264 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 TRMT2BQ96GJ1 504 aaKnown RBP17.92■□□□□ 0.46
CLDN4-201ENST00000340958 MYRFLQ96LU7 910 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 GDAP1L1Q96MZ0 367 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 GAS2L1Q99501 681 aaPredicted RBP17.92■□□□□ 0.46
CLDN4-201ENST00000340958 OSBPL2Q9H1P3 480 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 IRAK3Q9Y616 596 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 ATG2AQ2TAZ0 1938 aa17.92■□□□□ 0.46
CLDN4-201ENST00000340958 PLXNA3P51805 1871 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 OASLQ15646 514 aaKnown RBP17.91■□□□□ 0.46
CLDN4-201ENST00000340958 FCRL2Q96LA5 508 aaPredicted RBP17.91■□□□□ 0.46
CLDN4-201ENST00000340958 SAMD11Q96NU1 681 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 C10orf88Q9H8K7 445 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 I6L893 689 aaPredicted RBP17.91■□□□□ 0.46
CLDN4-201ENST00000340958 GRM6O15303 877 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 ERCC2P18074 760 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 ACTN2P35609 894 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 HCAR3P49019 387 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 GBE1Q04446 702 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 NNTQ13423 1086 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 GPM6BQ13491 265 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 EIF4EBP2Q13542 120 aaPredicted RBP17.91■□□□□ 0.46
CLDN4-201ENST00000340958 PABPC1LQ4VXU2 614 aaKnown RBP17.91■□□□□ 0.46
CLDN4-201ENST00000340958 PPM1LQ5SGD2 360 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 NCBP2-AS2Q69YL0 99 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 B4GALNT4Q76KP1 1039 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 PLXNA4Q9HCM2 1894 aa17.91■□□□□ 0.46
CLDN4-201ENST00000340958 KCNU1A8MYU2 1149 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms