RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 PYGBP11216 843 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 PDK1Q15118 436 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 SEPT7Q16181 437 aaKnown RBP16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 TRMT10BQ6PF06 316 aaKnown RBP16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 UGT1A7Q9HAW7 530 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 UGT1A10Q9HAW8 530 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 UGT1A8Q9HAW9 530 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 CSNK1G1Q9HCP0 422 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 XAB2Q9HCS7 855 aaKnown RBP16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 SLC40A1Q9NP59 571 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 TRMT13Q9NUP7 481 aaKnown RBP16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 HAUS2Q9NVX0 235 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 DDIT4Q9NX09 232 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 SEPT10Q9P0V9 454 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 KLHL14Q9P2G3 628 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 ABT1Q9ULW3 272 aaKnown RBP16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 INPP5FQ9Y2H2 1132 aa16.41■□□□□ 0.22
CCDC144A-202ENST00000340621 DCLK1O15075 740 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 TM9SF1O15321 606 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 EDF1O60869 148 aaKnown RBP16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 ODC1P11926 461 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 ELNP15502 786 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 BDNFP23560 247 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 GLUD2P49448 558 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 SLC18A2Q05940 514 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 GALNTL6Q49A17 601 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 FAM171BQ6P995 826 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 ECHDC2Q86YB7 292 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 PDCD7Q8N8D1 485 aaKnown RBP16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 ACBD6Q9BR61 282 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
CCDC144A-202ENST00000340621 HGSO14964 777 aaPredicted RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 LPXNO60711 386 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 RASSF9O75901 435 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 DNAJC8O75937 253 aaPredicted RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 RPLP2P05387 115 aaKnown RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 GSTA1P08263 222 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 ERCC2P18074 760 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 HNRNPH1P31943 449 aaKnown RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 RAB27AP51159 221 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 WASHC5Q12768 1159 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 SEMA3BQ13214 749 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 TTC39BQ5VTQ0 682 aaPredicted RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 LRRTM3Q86VH5 581 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 NTAN1Q96AB6 310 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 PGAP3Q96FM1 320 aaPredicted RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 TMEM209Q96SK2 561 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 PLCD4Q9BRC7 762 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 COLEC11Q9BWP8 271 aa16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 PIH1D1Q9NWS0 290 aaKnown RBP16.39■□□□□ 0.22
CCDC144A-202ENST00000340621 TRPM7Q96QT4 1865 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 TMEM88BA6NKF7 163 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 TRIM49D1C9J1S8 452 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 F8W810 466 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 ITGB1P05556 798 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 GSTA2P09210 222 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 FDFT1P37268 417 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 AIF1P55008 147 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 CRADDP78560 199 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 SCAPQ12770 1279 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 RNF43Q68DV7 783 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 METTL23Q86XA0 190 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 ZNF567Q8N184 647 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 GSDMBQ8TAX9 411 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 RXFP1Q9HBX9 757 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 ZNF180Q9UJW8 692 aa16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC144A-202ENST00000340621 OPHN1O60890 802 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 STK10O94804 968 aaKnown RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 CYP11A1P05108 521 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 SNRPAP09012 282 aaKnown RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 CSH1P0DML2 217 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 CSH2P0DML3 217 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 NEK3P51956 506 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 SARNPP82979 210 aaKnown RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 VPS11Q9H270 941 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 PCDHA11Q9Y5I1 949 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 SNX10Q9Y5X0 201 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 FAM159BA6NKW6 160 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 KCNK1O00180 336 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 PPP1R12AO14974 1030 aaPredicted RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 KRT37O76014 449 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 PSMB4P28070 264 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 ETV4P43268 484 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 CDK16Q00536 496 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 PARP6Q2NL67 630 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 INTS6LQ5JSJ4 861 aaKnown RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 BSPRYQ5W0U4 402 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 PM20D1Q6GTS8 502 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 OTOAQ7RTW8 1153 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 UNC5BQ8IZJ1 945 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 OR10T2Q8NGX3 314 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 OXNAD1Q96HP4 312 aaPredicted RBP16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 APOPT1Q96IL0 206 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 PKMYT1Q99640 499 aa16.38■□□□□ 0.21
CCDC144A-202ENST00000340621 WDCPQ9H6R7 721 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms