RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CYTH2Q99418 400 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 PEX6Q13608 980 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 GLT6D1Q7Z4J2 308 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 MYO1HQ8N1T3 1032 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 PPFIBP2Q8ND30 876 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 SDCCAG3Q96C92 435 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 SMAPO00193 183 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 FOXP2O15409 715 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 RNASEH2AO75792 299 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 GNSP15586 552 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 HDAC4P56524 1084 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 GLMNQ92990 594 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 FZD8Q9H461 694 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 SOAT2O75908 522 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 GLP2RO95838 553 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 MARSP56192 900 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 IL1RL1Q01638 556 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 MTM1Q13496 603 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 LRRC32Q14392 662 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 TRAPPC5Q8IUR0 188 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 C12orf50Q8NA57 414 aaPredicted RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 MAML1Q92585 1016 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 DYRK1BQ9Y463 629 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 MDM4O15151 490 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 ZNF438Q7Z4V0 828 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 PPIL6Q8IXY8 311 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 VCXQ9H320 206 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 NOVA2Q9UNW9 492 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 A0A0A6YYK5 440 aaPredicted RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 DBN1Q16643 649 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 ACAD11Q709F0 780 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 PNKPQ96T60 521 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 DUSP9Q99956 384 aaKnown RBP13.16□□□□□ -0.3
LIN54-201ENST00000340417 CEP41Q9BYV8 373 aa13.16□□□□□ -0.3
LIN54-201ENST00000340417 MGEA5O60502 916 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CNMDO75829 334 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 GRASPQ7Z6J2 395 aaPredicted RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 KAT5Q92993 513 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 RBM15Q96T37 977 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIN54-201ENST00000340417 EIF4E1BA6NMX2 242 aaKnown RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 GNGT2O14610 69 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CALCAP01258 141 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CA3P07451 260 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 NLNQ9BYT8 704 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 ITIH2P19823 946 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CAP1Q01518 475 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 ACAP1Q15027 740 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 LRRC40Q9H9A6 602 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 XPNPEP1Q9NQW7 623 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 TRIM10Q9UDY6 481 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 ATG13O75143 517 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 DAB1O75553 588 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 RPN2P04844 631 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 ZNF513Q8N8E2 541 aaPredicted RBP13.15□□□□□ -0.3
LIN54-201ENST00000340417 OR14C36Q8NHC7 312 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 TASP1Q9H6P5 420 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 SOHLH2Q9NX45 425 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 ZNHIT2Q9UHR6 403 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 MRFAP1Q9Y605 127 aa13.15□□□□□ -0.3
LIN54-201ENST00000340417 CFLARO15519 480 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 CFIP05156 583 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 MIPP30301 263 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 DHPSP49366 369 aaPredicted RBP13.15□□□□□ -0.31
LIN54-201ENST00000340417 DGKGP49619 791 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 GNGT1P63211 74 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 USP4Q13107 963 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 ART3Q13508 389 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 MAP3K21Q5TCX8 1036 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.31
LIN54-201ENST00000340417 C1orf127Q8N9H9 656 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 LZICQ8WZA0 190 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 E2F7Q96AV8 911 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 SNX12Q9UMY4 172 aa13.15□□□□□ -0.31
LIN54-201ENST00000340417 RPS6KL1Q9Y6S9 549 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms