RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DENND5BQ6ZUT9 1274 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 SMG8Q8ND04 991 aaKnown RBP16.83■□□□□ 0.28
LITAF-201ENST00000339430 STK32AQ8WU08 396 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 FAM149B1Q96BN6 582 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 SIGLEC10Q96LC7 697 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 TMEM120AQ9BXJ8 343 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 CEP41Q9BYV8 373 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 SNX25Q9H3E2 840 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 EBF2Q9HAK2 575 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 DTLQ9NZJ0 730 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 CNTN3Q9P232 1028 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 CCDC195A0A1B0GUA6 201 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 PRKCHP24723 683 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 CDK7P50613 346 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 CRADDP78560 199 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 MROH9Q5TGP6 573 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 FBXO46Q6PJ61 603 aaPredicted RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 ALKAL1Q6UXT8 129 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 CHSY1Q86X52 802 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 UNC5BQ8IZJ1 945 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 ARMC2Q8NEN0 867 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 CENPIQ92674 756 aaPredicted RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 INPP5DQ92835 1189 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 LGMNQ99538 433 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 UBQLN1Q9UMX0 589 aaKnown RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 SMIM28A0A1B0GU29 152 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 GCATO75600 419 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 RFPL1O75677 317 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 VAV1P15498 845 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 TKTP29401 623 aaKnown RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 SERPINB3P29508 390 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 MAGEA6P43360 314 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 PITX1P78337 314 aaPredicted RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 MRPS5P82675 430 aaKnown RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 SOX4Q06945 474 aaPredicted RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 CTC1Q2NKJ3 1217 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 PARP6Q2NL67 630 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 NSMCE1Q8WV22 266 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 N4BP2L2Q92802 583 aaPredicted RBP16.82■□□□□ 0.28
LITAF-201ENST00000339430 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 KCNK13Q9HB14 408 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 PCMTD2Q9NV79 361 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.82■□□□□ 0.28
LITAF-201ENST00000339430 SLC17A6Q9P2U8 582 aa16.82■□□□□ 0.28
LITAF-201ENST00000339430 CLDN5O00501 218 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 PIRO00625 290 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 CYB561D2O14569 222 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 DIAPH2O60879 1101 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 SULT1E1P49888 294 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 ZBTB16Q05516 673 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 ADIGQ0VDE8 80 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 DEFB106AQ8N104 65 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 FAM13CQ8NE31 585 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 ZNF398Q8TD17 642 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 QKIQ96PU8 341 aaKnown RBP eCLIP16.81■□□□□ 0.287e-9■■■■■ 34.6
LITAF-201ENST00000339430 EBNA1BP2Q99848 306 aaKnown RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 CHST12Q9NRB3 414 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 NOP53Q9NZM5 478 aaKnown RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 TRDMT1O14717 391 aaKnown RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 ACAT1P24752 427 aaKnown RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 MAGEA3P43357 314 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 CASC4Q6P4E1 433 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 MCUQ8NE86 351 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 APPL2Q8NEU8 664 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 GSDMBQ8TAX9 411 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 ZNF395Q9H8N7 513 aaPredicted RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 FAM105AQ9NUU6 356 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 ARL8BQ9NVJ2 186 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 NKX1-2Q9UD57 310 aaPredicted RBP16.81■□□□□ 0.28
LITAF-201ENST00000339430 C15orf41Q9Y2V0 281 aa16.81■□□□□ 0.28
LITAF-201ENST00000339430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.8■□□□□ 0.28
LITAF-201ENST00000339430 FAM237BA0A1B0GVD1 139 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 DLDP09622 509 aaKnown RBP16.8■□□□□ 0.28
LITAF-201ENST00000339430 ZFXP17010 805 aaPredicted RBP16.8■□□□□ 0.28
LITAF-201ENST00000339430 RASSF2P50749 326 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 RABGGTBP53611 331 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 DCAF6Q58WW2 860 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 LGSNQ5TDP6 509 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 BSPRYQ5W0U4 402 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 CRYBG2Q8N1P7 616 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 DEPDC1BQ8WUY9 529 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 HTR3CQ8WXA8 447 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 NCAPGQ9BPX3 1015 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 ZNF180Q9UJW8 692 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 PLLPQ9Y342 182 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 WDR27A2RRH5 827 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 HMX2A2RU54 273 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 MFSD11O43934 449 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 PQBP1O60828 265 aaKnown RBP16.8■□□□□ 0.28
LITAF-201ENST00000339430 BEST1O76090 585 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 HAUS5O94927 633 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 MYL2P10916 166 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 TPSB2P20231 275 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms