RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TRIP4Q15650 581 aaPredicted RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 HECTD3Q5T447 861 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 SNX30Q5VWJ9 437 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 NCBP2-AS2Q69YL0 99 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 DARS2Q6PI48 645 aaKnown RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 TADA2BQ86TJ2 420 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 ALLCQ8N6M5 410 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 SEC14L1Q92503 715 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 FCRL2Q96LA5 508 aaPredicted RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 GDAP1L1Q96MZ0 367 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 TMEM51Q9NW97 253 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 UXTQ9UBK9 157 aaPredicted RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 XPO7Q9UIA9 1087 aaKnown RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 LRIG2O94898 1065 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 IFNB1P01574 187 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 KRT14P02533 472 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 APOEP02649 317 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 ERCC2P18074 760 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 EPHB2P29323 1055 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 RPL21P46778 160 aaKnown RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 NNTQ13423 1086 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 GPM6BQ13491 265 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 PTK6Q13882 451 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 DPYSQ14117 519 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 CCDC33Q8N5R6 958 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 SLC12A6Q9UHW9 1150 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 DNMT3LQ9UJW3 386 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 GBF1Q92538 1859 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 LAMA3Q16787 3333 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 ETS1P14921 441 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 ADCY8P40145 1251 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 HCAR3P49019 387 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 NR2C2P49116 596 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 CLCN4P51793 760 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 SLC10A2Q12908 348 aaPredicted RBP15.18■□□□□ 0.02
CBX3-201ENST00000337620 BEND6Q5SZJ8 279 aaPredicted RBP15.18■□□□□ 0.02
CBX3-201ENST00000337620 GLIS1Q8NBF1 620 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 LRRN4Q8WUT4 740 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 SAMD11Q96NU1 681 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 PRDM16Q9HAZ2 1276 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 ZNF334Q9HCZ1 680 aaPredicted RBP15.18■□□□□ 0.02
CBX3-201ENST00000337620 ASB3Q9Y575 518 aa15.18■□□□□ 0.02
CBX3-201ENST00000337620 C2orf78A6NCI8 922 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 COCHO43405 550 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 ZSCAN5DPP0CG00 497 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 PPP3CCP48454 512 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 ZNF135P52742 658 aaPredicted RBP15.17■□□□□ 0.02
CBX3-201ENST00000337620 DRG2P55039 364 aaKnown RBP15.17■□□□□ 0.02
CBX3-201ENST00000337620 ERVK-21P61565 698 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 UNC45BQ8IWX7 931 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 ZNF276Q8N554 614 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 ATP6V0D2Q8N8Y2 350 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 CCDC89Q8N998 374 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 NETO2Q8NC67 525 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 DTLQ9NZJ0 730 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 NEU2Q9Y3R4 380 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 HS3ST4Q9Y661 456 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 DCLK1O15075 740 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
CBX3-201ENST00000337620 KPNA1P52294 538 aaPredicted RBP15.17■□□□□ 0.02
CBX3-201ENST00000337620 PLTPP55058 493 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 GDF10P55107 478 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 FAM71DQ8N9W8 422 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 AENQ8WTP8 325 aaKnown RBP15.17■□□□□ 0.02
CBX3-201ENST00000337620 PBX4Q9BYU1 374 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 NEUROG2Q9H2A3 272 aa15.17■□□□□ 0.02
CBX3-201ENST00000337620 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 H3BNC9 293 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 CCL16O15467 120 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 MFSD11O43934 449 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 F11P03951 625 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 FAM153BP0C7A2 387 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 ECHS1P30084 290 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 KCNQ1P51787 676 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 MLLT6P55198 1093 aaPredicted RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 CALCOCO2Q13137 446 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 FAM153CQ494X1 144 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 PABPC1LQ4VXU2 614 aaKnown RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 PPM1LQ5SGD2 360 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 PIK3R6Q5UE93 754 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 BZW1Q7L1Q6 419 aaKnown RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 TMEM150AQ86TG1 271 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 HS6ST3Q8IZP7 471 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 SLC22A17Q8WUG5 538 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 BTN2A3PQ96KV6 586 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 RNF38Q9H0F5 515 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 TRPC7Q9HCX4 862 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 ZNF446Q9NWS9 450 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 GRHL1Q9NZI5 618 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 FAM153AQ9UHL3 310 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 HBS1LQ9Y450 684 aaKnown RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 MYO7AQ13402 2215 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 PER2O15055 1255 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 IGLV3-27P01718 113 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms