RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RPL22P35268 128 aaKnown RBP14.08□□□□□ -0.16
RTN4-202ENST00000337526 CHKAP35790 457 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 PDK4Q16654 411 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 SPANXN3Q5MJ09 141 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 ZNF470Q6ECI4 717 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 RIPOR1Q6ZS17 1223 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 DEFB132Q7Z7B7 95 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 PORCNQ9H237 461 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 A1CFQ9NQ94 594 aaKnown RBP14.08□□□□□ -0.16
RTN4-202ENST00000337526 TRHDEQ9UKU6 1024 aa14.08□□□□□ -0.16
RTN4-202ENST00000337526 ARHGEF28Q8N1W1 1705 aaKnown RBP14.08□□□□□ -0.16
RTN4-202ENST00000337526 WNT10BO00744 389 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 ENDOD1O94919 500 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 PSMG1O95456 288 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 CCDC159P0C7I6 412 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 CDC25CP30307 473 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 SOAT1P35610 550 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 RNF43Q68DV7 783 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 TBC1D19Q8N5T2 526 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 ADAM32Q8TC27 787 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 GLT1D1Q96MS3 346 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 PIF1Q9H611 641 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 PPLO60437 1756 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 FAM237BA0A1B0GVD1 139 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 PIAS1O75925 651 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 ATP5BP06576 529 aaKnown RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 AKAP5P24588 427 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 PRKAA2P54646 552 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 NR6A1Q15406 480 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 CYP51A1Q16850 503 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 C15orf59Q2T9L4 293 aaPredicted RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 PREPLQ4J6C6 727 aaPredicted RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 TAF2Q6P1X5 1199 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 OR6Y1Q8NGX8 325 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 HASPINQ8TF76 798 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 BBS2Q9BXC9 721 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 SLC12A8A0AV02 714 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 ZNF286BP0CG31 522 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 MZF1P28698 734 aaPredicted RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 RENBPP51606 427 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 RAD23AP54725 363 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 PPP1R10Q96QC0 940 aaKnown RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 SEPHS2Q99611 448 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 ETNK2Q9NVF9 386 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 RRN3Q9NYV6 651 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 CCDC167Q9P0B6 97 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 MROH7Q68CQ1 1323 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 OAZ1P54368 228 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 OXCT1P55809 520 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 FASTKQ14296 549 aaKnown RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 ECM1Q16610 540 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 NFE2Q16621 373 aaPredicted RBP14.07□□□□□ -0.16
RTN4-202ENST00000337526 TMC7Q7Z402 723 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 MYO1HQ8N1T3 1032 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 SEMA4DQ92854 862 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 SH3GL1Q99961 368 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 PRKD2Q9BZL6 878 aa14.07□□□□□ -0.16
RTN4-202ENST00000337526 F8W810 466 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 INPP4BO15327 924 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 ENTPD5O75356 428 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 ABHD2P08910 425 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 RPL7AP62424 266 aaKnown RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 BMT2Q1RMZ1 405 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 ARSHQ5FYA8 562 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 OTUD3Q5T2D3 398 aaPredicted RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 ZFP1Q6P2D0 407 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SLC27A1Q6PCB7 646 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 DHFR2Q86XF0 187 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 PYDC1Q8WXC3 89 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 ZFYVE28Q9HCC9 887 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 H2AFY2Q9P0M6 372 aaPredicted RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 FAM198AQ9UFP1 575 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SYNPO2Q9UMS6 1093 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 MROH2AA6NES4 1674 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 HACD1B0YJ81 288 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 C2CD2LO14523 706 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 MRASO14807 208 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 OPLAHO14841 1288 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SERPINF2P08697 491 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 CRABP2P29373 138 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SCNN1BP51168 640 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 LPCAT2Q7L5N7 544 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 FAM9CQ8IZT9 166 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 CENPLQ8N0S6 344 aaPredicted RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 ALLCQ8N6M5 410 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 RMND5AQ9H871 391 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 TNFAIP8O95379 198 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 PIGNO95427 931 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 YBX3P16989 372 aaKnown RBP eCLIP14.06□□□□□ -0.162e-23■□□□□ 9.5
RTN4-202ENST00000337526 MMP13P45452 471 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 PLK1P53350 603 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 HUNKP57058 714 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms