RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PAX3P23760 479 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 NRLP54845 237 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 WASHC5Q12768 1159 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 RALGDSQ12967 914 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 KLF10Q13118 480 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 CYP51A1Q16850 503 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 SAMD7Q7Z3H4 446 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 TREML1Q86YW5 311 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 LENG8Q96PV6 779 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 SORCS3Q9UPU3 1222 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 UBR1Q8IWV7 1749 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 GPD1P21695 349 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 IREB2P48200 963 aaKnown RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 KRT76Q01546 638 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 BNIP3Q12983 259 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 OFCC1Q8IZS5 231 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 OR8H2Q8N162 312 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 DQX1Q8TE96 717 aaKnown RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 SKA2Q8WVK7 121 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 BTBD9Q96Q07 612 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 ROGDIQ9GZN7 287 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 RAD21L1Q9H4I0 556 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 RERGLQ9H628 205 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 IPO11Q9UI26 975 aaKnown RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 BARX2Q9UMQ3 279 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 PHF24Q9UPV7 400 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 TOR1BO14657 336 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 UBDO15205 165 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 ZNF862O60290 1169 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 MGAT1P26572 445 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 STT3AP46977 705 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 TPTEP56180 551 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 GTF2H3Q13889 308 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 FASTKQ14296 549 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 POC5Q8NA72 575 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PPP1R14BQ96C90 147 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 DEPDC7Q96QD5 511 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SARS2Q9NP81 518 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 IARS2Q9NSE4 1012 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 FBXO28Q9NVF7 368 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 UBP1Q9NZI7 540 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 EGFL7Q9UHF1 273 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 CROTQ9UKG9 612 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 AP4E1Q9UPM8 1137 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PLLPQ9Y342 182 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PCDHA10Q9Y5I2 948 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 TMEM247A6NEH6 219 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 NDUFB5O43674 189 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 BPGMP07738 259 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 T-ENOLP0DO92 83 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PIK3R1P27986 724 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 GAD2Q05329 585 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 CYP24A1Q07973 514 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 DMC1Q14565 340 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 EFHC2Q5JST6 749 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 CMC1Q7Z7K0 106 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PHF21BQ96EK2 531 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SREBF1P36956 1147 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 GSSP48637 474 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PSME3P61289 254 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 MOGSQ13724 837 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 FRA10AC1Q70Z53 315 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SIK2Q9H0K1 926 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 TRPC5OSA6NMA1 111 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 MT-ND1P03886 318 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PABPC4LP0CB38 370 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PTGER2P43116 358 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SEPHS1P49903 392 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 TMEM53Q6P2H8 277 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 PDSS2Q86YH6 399 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 FRMD8Q9BZ67 464 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 CEP44Q9C0F1 390 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 NIF3L1Q9GZT8 377 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 ZFYVE28Q9HCC9 887 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 ZNF232Q9UNY5 417 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
COL2A1-201ENST00000337299 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-201ENST00000337299 RGSL1A5PLK6 1076 aa13.55□□□□□ -0.24
COL2A1-201ENST00000337299 HADHAP40939 763 aa13.55□□□□□ -0.24
COL2A1-201ENST00000337299 IL5RAQ01344 420 aa13.55□□□□□ -0.24
COL2A1-201ENST00000337299 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms