RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ATP5C1P36542 298 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 CSE1LP55060 971 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 STOX1Q6ZVD7 989 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 RUVBL2Q9Y230 463 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 PRR23AA6NEV1 266 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 SUPT7LO94864 414 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 HTR1BP28222 390 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 PSEN2P49810 448 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 HNMTP50135 292 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 FAM163AQ96GL9 167 aaPredicted RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 AGPAT5Q9NUQ2 364 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 C1QTNF3-AMACRE9PGA6 284 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 KIF1CO43896 1103 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 ECDO95905 644 aaPredicted RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 TKTL1P51854 596 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 MMADHCQ9H3L0 296 aaPredicted RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 ZBTB14O43829 449 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ADH1AP07327 375 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 CALB2P22676 271 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 HNRNPH2P55795 449 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 RIT1Q92963 219 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 MAGED4Q96JG8 741 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 PPP1R36Q96LQ0 422 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 KLK14Q9P0G3 267 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 CTSEP14091 401 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 BCL2L1Q07817 233 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 SPDYCQ5MJ68 293 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 CDC73Q6P1J9 531 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 SUSD6Q92537 303 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 NT5MQ9NPB1 228 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ZMYM5Q9UJ78 669 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 GNPTGQ9UJJ9 305 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 O00370 1275 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 STX11O75558 287 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ADH1CP00326 375 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 MAGEA10P43363 369 aaPredicted RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 RIOX2Q8IUF8 465 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 TBKBP1A7MCY6 615 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ADCY3O60266 1144 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 PCNAP12004 261 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ACADSP16219 412 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ALDH5A1P51649 535 aaPredicted RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 MROH9Q5TGP6 573 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 EID3Q8N140 333 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 MED8Q96G25 268 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 POLR1EQ9GZS1 481 aaKnown RBP12.55□□□□□ -0.4
FN1-202ENST00000336916 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 GPD2P43304 727 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 MRPS35P82673 323 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 ADIGQ0VDE8 80 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ACOX1Q15067 660 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 CYP20A1Q6UW02 462 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 GLT6D1Q7Z4J2 308 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ACTR8Q9H981 624 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 CCNI2Q6ZMN8 369 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 IDI2Q9BXS1 227 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 ATP13A3Q9H7F0 1226 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.54□□□□□ -0.41e-24■■■■□ 24.1
FN1-202ENST00000336916 UBA2Q9UBT2 640 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 POLLQ9UGP5 575 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 KRT34O76011 436 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 CYP2F1P24903 491 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 YWHAZP63104 245 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 DSG1Q02413 1049 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ZDHHC20Q5W0Z9 365 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 PPP1R14AQ96A00 147 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 PI4K2AQ9BTU6 479 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ZDHHC4Q9NPG8 344 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 SESN1Q9Y6P5 492 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ATRNO75882 1429 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 CENPXA8MT69 81 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 CNOT3O75175 753 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 NOS3P29474 1203 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 SKIV2L2P42285 1042 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 ITGA1P56199 1179 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 MGAT5Q09328 741 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 FNDC3BQ53EP0 1204 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 BEND7Q8N7W2 519 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 BCL9O00512 1426 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 CBX4O00257 560 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 GPR15P49685 360 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 GIT2Q14161 759 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 DDR2Q16832 855 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms