RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PGK1P00558 417 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 POLBP06746 335 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 ITGAVP06756 1048 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 FGFR3P22607 806 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 CALB2P22676 271 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 KLRC2P26717 231 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 SLC6A3Q01959 620 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 ZNF268Q14587 947 aaPredicted RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 PLEKHG4Q58EX7 1191 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 RNF220Q5VTB9 566 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 B3GNT9Q6UX72 402 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 CYP2R1Q6VVX0 501 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 RINLQ6ZS11 566 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 PDZD4Q76G19 769 aaPredicted RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 BZW1Q7L1Q6 419 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 UCMAQ8WVF2 138 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 WDR60Q8WVS4 1066 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 ALKBH8Q96BT7 664 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 ELMO2Q96JJ3 720 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 AGAP2Q99490 1192 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 NDNQ99608 321 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 BTBD10Q9BSF8 475 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 STRA6Q9BX79 667 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 ZNF518BQ9C0D4 1074 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 RNPEPL1Q9HAU8 725 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 TNRC6CQ9HCJ0 1690 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 SDR42E2A6NKP2 422 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 IL18RAPO95256 599 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 RALBP11234 206 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 MX2P20592 715 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 SP100P23497 879 aaPredicted RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 PMLP29590 882 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 KLF1Q13351 362 aaPredicted RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 CSHL1Q14406 222 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 ARL13BQ3SXY8 428 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 SPOUT1Q5T280 376 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 LPCAT4Q643R3 524 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 CXCL17Q6UXB2 119 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 C10orf107Q8IVU9 208 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 RIBC1Q8N443 379 aaPredicted RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 DCBLD1Q8N8Z6 715 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 SPATA22Q8NHS9 363 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 APOPT1Q96IL0 206 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 TNIP3Q96KP6 325 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 SEMA6AQ9H2E6 1030 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 MTO1Q9Y2Z2 717 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 NAV1Q8NEY1 1877 aa8.46□□□□□ -1.06
HPS4-201ENST00000336873 MYH9P35579 1960 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 LAMA2P24043 3122 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.06
HPS4-201ENST00000336873 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TPD52L2O43399 206 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 MGRN1O60291 552 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 LUC7L3O95232 432 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 OR4Q2P0C623 313 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 ABCD1P33897 745 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 GPD2P43304 727 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 CCR10P46092 362 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SLC1A6P48664 564 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 AP2B1P63010 937 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 YWHAZP63104 245 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 DGKDQ16760 1214 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SOWAHAQ2M3V2 549 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 NOTUMQ6P988 496 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TTC30AQ86WT1 665 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 DDIASQ8IXT1 998 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 RBM15BQ8NDT2 890 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 OLIG1Q8TAK6 271 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 NAT14Q8WUY8 206 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 ERLEC1Q96DZ1 483 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 LRGUKQ96M69 825 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 ST6GALNAC4Q9H4F1 302 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 CHRAC1Q9NRG0 131 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 MAP3K20Q9NYL2 800 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 TAS2R1Q9NYW7 299 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 APPL1Q9UKG1 709 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 RUVBL2Q9Y230 463 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 CRYL1Q9Y2S2 319 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 A0A096LPK6 155 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 CCDC189A1A4V9 331 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 GIPC1O14908 333 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 XPOTO43592 962 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 PGM3O95394 542 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 AMHP03971 560 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TGFB3P10600 412 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 FGFR1P11362 822 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 HNRNPLP14866 589 aaKnown RBP eCLIP8.45□□□□□ -1.06
HPS4-201ENST00000336873 TAF6P49848 677 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SYPL2Q5VXT5 272 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 PPP1R2P3Q6NXS1 205 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TRIM42Q8IWZ5 723 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 PCDH20Q8N6Y1 951 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 SPDYE1Q8NFV5 336 aaPredicted RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 CDC26Q8NHZ8 85 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 FBXO27Q8NI29 283 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 MIEF2Q96C03 454 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 P2RY11Q96G91 374 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 CNBD2Q96M20 576 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms