RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 HS3ST4Q9Y661 456 aa18.14■□□□□ 0.49
CHGA-202ENST00000334654 DOCK4Q8N1I0 1966 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 C19orf67A6NJJ6 358 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 FAM72CH0Y354 149 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 PRPSAP2O60256 369 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 GGCXP38435 758 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 AIF1P55008 147 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 SEMA3BQ13214 749 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 BOLA3Q53S33 107 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 KCNT1Q5JUK3 1230 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 ADGRF1Q5T601 910 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 FAM72AQ5TYM5 149 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 FAM72DQ6L9T8 149 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 C14orf80Q86SX3 495 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 FAM72BQ86X60 149 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 ADGRG2Q8IZP9 1017 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 OSBPL2Q9H1P3 480 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 ZWILCHQ9H900 591 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 ZNF510Q9Y2H8 683 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 WNT6Q9Y6F9 365 aa18.13■□□□□ 0.49
CHGA-202ENST00000334654 GOLGA6L9A6NEM1 432 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 SPOPO43791 374 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 FTCDO95954 541 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 PSMC3P17980 439 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 SLC11A2P49281 568 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 ARSEP51690 589 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 GRM2Q14416 872 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 SMTNL2Q2TAL5 461 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 EML3Q32P44 896 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 ARL13BQ3SXY8 428 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 LRRC38Q5VT99 294 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 SLC44A3Q8N4M1 653 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 DEPDC1BQ8WUY9 529 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 OSCP1Q8WVF1 389 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 TEKT4Q8WW24 435 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 KRT35Q92764 455 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 NXPE3Q969Y0 559 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 ZFYVE19Q96K21 471 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 C1orf74Q96LT6 269 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 SLC12A6Q9UHW9 1150 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 AP4E1Q9UPM8 1137 aa18.12■□□□□ 0.49
CHGA-202ENST00000334654 ARNTLO00327 626 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 L1CAMP32004 1257 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 SSR1P43307 286 aaKnown RBP18.11■□□□□ 0.49
CHGA-202ENST00000334654 MARCKSL1P49006 195 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 PEX5P50542 639 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 NRG1Q02297 640 aaPredicted RBP18.11■□□□□ 0.49
CHGA-202ENST00000334654 HADHQ16836 314 aaKnown RBP18.11■□□□□ 0.49
CHGA-202ENST00000334654 MANEALQ5VSG8 457 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 RAP1GAP2Q684P5 730 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 TRIM68Q6AZZ1 485 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 RFWD3Q6PCD5 774 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 POLNQ7Z5Q5 900 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 PSTKQ8IV42 348 aaKnown RBP18.11■□□□□ 0.49
CHGA-202ENST00000334654 SYCE1Q8N0S2 351 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 CPXM2Q8N436 756 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 TRIM58Q8NG06 486 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 FAM71BQ8TC56 605 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 OTUB2Q96DC9 234 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 SIK2Q9H0K1 926 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 IGSF9Q9P2J2 1179 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 TBC1D14Q9P2M4 693 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 PACSIN2Q9UNF0 486 aaPredicted RBP18.11■□□□□ 0.49
CHGA-202ENST00000334654 NEU3Q9UQ49 428 aa18.11■□□□□ 0.49
CHGA-202ENST00000334654 TRDMT1O14717 391 aaKnown RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 CHADO15335 359 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 ASGR2P07307 311 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 TACR2P21452 398 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 CTNNA2P26232 953 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 CTNNA1P35221 906 aaKnown RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 VCPP55072 806 aaKnown RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 MTA1Q13330 715 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 AUHQ13825 339 aaKnown RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 DPYSL2Q16555 572 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 C5orf22Q49AR2 442 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 MEI1Q5TIA1 1274 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 FBXL22Q6P050 247 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 RHBDF2Q6PJF5 856 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 PEX26Q7Z412 305 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 RHOT1Q8IXI2 618 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 HES6Q96HZ4 224 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 PRICKLE1Q96MT3 831 aaPredicted RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 KCTD15Q96SI1 283 aaPredicted RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 HPS4Q9NQG7 708 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 DUS2Q9NX74 493 aaKnown RBP18.1■□□□□ 0.49
CHGA-202ENST00000334654 OR12D3Q9UGF7 316 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 AMFRQ9UKV5 643 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 PCDHA3Q9Y5H8 950 aa18.1■□□□□ 0.49
CHGA-202ENST00000334654 IGLV3-10A0A075B6K4 115 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 OTOL1A6NHN0 477 aaPredicted RBP18.09■□□□□ 0.49
CHGA-202ENST00000334654 SLC9A3R1O14745 358 aaPredicted RBP18.09■□□□□ 0.49
CHGA-202ENST00000334654 DDX3YO15523 660 aaKnown RBP18.09■□□□□ 0.49
CHGA-202ENST00000334654 PSTPIP1O43586 416 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 KRT7P08729 469 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 ARSAP15289 507 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 SGSHP51688 502 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 EFHC2Q5JST6 749 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 ZNF569Q5MCW4 686 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 TMEM25Q86YD3 366 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 SLC35F6Q8N357 371 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms