RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MGEA5O60502 916 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 H2AFYO75367 372 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 GLI1P08151 1106 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 EPB42P16452 691 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MMP13P45452 471 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 SMAD3P84022 425 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MTBPQ96DY7 904 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 MRPL1Q9BYD6 325 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 EPN3Q9H201 632 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 UTP6Q9NYH9 597 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 AOC2O75106 756 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 LMNAP02545 664 aaKnown RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 ELK3P41970 407 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 LRRC74AQ0VAA2 488 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 CAMK2GQ13555 558 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-201ENST00000334490 RD3Q7Z3Z2 195 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 DENND1CQ8IV53 801 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 KATNAL2Q8IYT4 538 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 VAT1Q99536 393 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 DCDC2Q9UHG0 476 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 LNPEPQ9UIQ6 1025 aa15.4■□□□□ 0.06
C9orf47-201ENST00000334490 SPATA31D3P0C874 917 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 LAG3P18627 525 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 SP100P23497 879 aaPredicted RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 DUSP4Q13115 394 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 DNAJC3Q13217 504 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 SPATA31D4Q6ZUB0 917 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 MDM1Q8TC05 714 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 CYP4F12Q9HCS2 524 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 HACD1B0YJ81 288 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 TLR5O60602 858 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 PARNO95453 639 aaKnown RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 GLUD1P00367 558 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 PLPP4Q5VZY2 271 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 WDR93Q6P2C0 686 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 LNX1Q8TBB1 728 aaPredicted RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 ILKAPQ9H0C8 392 aaPredicted RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 TSPAN1O60635 241 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 USP12O75317 370 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 PGM1P36871 562 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 GLUD2P49448 558 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 NOMO3P69849 1222 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 WASHC5Q12768 1159 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 CSHL1Q14406 222 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 HSP90AA5PQ58FG0 334 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 HNRNPLLQ8WVV9 542 aaKnown RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 SNRNP25Q9BV90 132 aaKnown RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 NFKBIZQ9BYH8 718 aa15.39■□□□□ 0.05
C9orf47-201ENST00000334490 POLR1EQ9GZS1 481 aaKnown RBP15.39■□□□□ 0.05
C9orf47-201ENST00000334490 PDZK1P1A8MUH7 402 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 DNALI1O14645 258 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SERPINB4P48594 390 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 NDUFV1P49821 464 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 HIC1Q14526 733 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ARMC12Q5T9G4 340 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 VPS37AQ8NEZ2 397 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SPPL2BQ8TCT7 592 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 TEX12Q9BXU0 123 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 PDZD7Q9H5P4 517 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 GPR25O00155 361 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 MGAT1P26572 445 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ERFP50548 548 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 BTKQ06187 659 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 BMPR2Q13873 1038 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 TARBP2Q15633 366 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 PCYOX1LQ8NBM8 494 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 GMLQ99445 158 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 DUSP16Q9BY84 665 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 PRKD2Q9BZL6 878 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 C10orf88Q9H8K7 445 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SAE1Q9UBE0 346 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SKAP2O75563 359 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 VAPBO95292 243 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 RAP1GDS1P52306 607 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SPATA20Q8TB22 786 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SRPK1Q96SB4 655 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 PRPF18Q99633 342 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 CHST7Q9NS84 486 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 TRMT13Q9NUP7 481 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 LOC100653049A0A140TA62 436 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 A8MX80 341 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 KRT34O76011 436 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 PECAM1P16284 738 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ITGB6P18564 788 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 MSH3P20585 1137 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 MARSP56192 900 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 POLR2LP62875 67 aaKnown RBP15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ATP13A4Q4VNC1 1196 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 NLRP9Q7RTR0 991 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ATAD1Q8NBU5 361 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 BAP1Q92560 729 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 CCDC126Q96EE4 140 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 ING2Q9H160 280 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 SEMA4AQ9H3S1 761 aa15.38■□□□□ 0.05
C9orf47-201ENST00000334490 CNGB3Q9NQW8 809 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms