RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ARHGAP15Q53QZ3 475 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 PPP6R3Q5H9R7 873 aaPredicted RBP17.11■□□□□ 0.33
SHOX-201ENST00000334060 MS4A13Q5J8X5 152 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
SHOX-201ENST00000334060 CFAP52Q8N1V2 620 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 LEMD2Q8NC56 503 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 TTC8Q8TAM2 541 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 RPGRIP1Q96KN7 1286 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 OLA1Q9NTK5 396 aaKnown RBP17.11■□□□□ 0.33
SHOX-201ENST00000334060 ETNK2Q9NVF9 386 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 AMFRQ9UKV5 643 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 ARHGAP26Q9UNA1 814 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 MYOFQ9NZM1 2061 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 MAP3K6O95382 1288 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 LAMP2P13473 410 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 KRT10P13645 584 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 CCR1P32246 355 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 ARSEP51690 589 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 CBX1P83916 185 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 TNK2Q07912 1038 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 Q6ZNB5 142 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 TRIM58Q8NG06 486 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 ZNF592Q92610 1267 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 NDFIP2Q9NV92 336 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 PLK2Q9NYY3 685 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 MPP6Q9NZW5 540 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 CLEC4EQ9ULY5 219 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 NUP210Q8TEM1 1887 aaPredicted RBP17.1■□□□□ 0.33
SHOX-201ENST00000334060 CREB3O43889 395 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 CNTN5O94779 1100 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 KRT1P04264 644 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 GOT1P17174 413 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 L1CAMP32004 1257 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 ETF1P62495 437 aaKnown RBP17.1■□□□□ 0.33
SHOX-201ENST00000334060 VITQ6UXI7 678 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 ZNF683Q8IZ20 524 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 ZDHHC14Q8IZN3 488 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 RIPOR3Q96MK2 946 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 ALS2CR12Q96Q35 445 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
SHOX-201ENST00000334060 FAM118BQ9BPY3 351 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 PCDH18Q9HCL0 1135 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 VANGL2Q9ULK5 521 aa17.1■□□□□ 0.33
SHOX-201ENST00000334060 LRRD1A4D1F6 860 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 HEPACAM2A8MVW5 462 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 ASGR2P07307 311 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 RPS24P62847 133 aaKnown RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 USP4Q13107 963 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 SMAD4Q13485 552 aaKnown RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 ERMARDQ5T6L9 678 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 IER5LQ5T953 404 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 PTCRAQ6ISU1 281 aaPredicted RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 B4GALNT4Q76KP1 1039 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 TXLNBQ8N3L3 684 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 ANTXRLA6NF34 631 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 LRIG2O94898 1065 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 GBP1P32455 592 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 MTHFRP42898 656 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 SLC1A1P43005 524 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 CDH6P55285 790 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 SEMA3BQ13214 749 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 DPYSL3Q14195 570 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 ALFQ53S48 1182 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 TPGS1Q6ZTW0 290 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 ADAT2Q7Z6V5 191 aaKnown RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 RHOT1Q8IXI2 618 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 HEMGNQ9BXL5 484 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 SAE1Q9UBE0 346 aaPredicted RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 HBS1LQ9Y450 684 aaKnown RBP17.09■□□□□ 0.33
SHOX-201ENST00000334060 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
SHOX-201ENST00000334060 KCNK3O14649 394 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 TRIM24O15164 1050 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 FGF19O95750 216 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 ARSAP15289 507 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 CTNNA2P26232 953 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 MESP2Q0VG99 397 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 AUHQ13825 339 aaKnown RBP17.08■□□□□ 0.33
SHOX-201ENST00000334060 PPP2R5DQ14738 602 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 FBXL22Q6P050 247 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 WFDC5Q8TCV5 224 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 TRIM62Q9BVG3 475 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.33
SHOX-201ENST00000334060 RRN3Q9NYV6 651 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 OR12D3Q9UGF7 316 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 NR2E1Q9Y466 385 aa17.08■□□□□ 0.33
SHOX-201ENST00000334060 GOLGA6L9A6NEM1 432 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 ACSL4O60488 711 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 KDELR1P24390 212 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 COG7P83436 770 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 AMPD2Q01433 879 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 RING1Q06587 406 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms