RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RUBCNQ92622 972 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CD101Q93033 1021 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CYFIP2Q96F07 1278 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 TMEM176AQ96HP8 235 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 UBL7Q96S82 380 aaPredicted RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 P2RY13Q9BPV8 354 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 DUSP16Q9BY84 665 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 TRPC7Q9HCX4 862 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CLIC5Q9NZA1 410 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 FNDC3AQ9Y2H6 1198 aaKnown RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.66□□□□□ -1.34
SMG1-201ENST00000330588 K7ESF4 209 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 HOXC11O43248 304 aaPredicted RBP6.66□□□□□ -1.34
SMG1-201ENST00000330588 COCHO43405 550 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 SETSIPP0DME0 302 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 CCDC130P13994 396 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 ARSAP15289 507 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 RAP1GAPP47736 663 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 FMO5P49326 533 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 KIF11P52732 1056 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 PMS1P54277 932 aaKnown RBP6.66□□□□□ -1.34
SMG1-201ENST00000330588 BCAT1P54687 386 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 RAD23BP54727 409 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 SLC8A3P57103 927 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 GCNT1Q02742 428 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 TNK2Q07912 1038 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 PAK1Q13153 545 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 CUL2Q13617 745 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 PON2Q15165 354 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 E2F5Q15329 346 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 LAIR1Q6GTX8 287 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 SPOPLQ6IQ16 392 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 FSTL4Q6MZW2 842 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 HTR3DQ70Z44 454 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 SYT13Q7L8C5 426 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 LONP2Q86WA8 852 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 TRIM59Q8IWR1 403 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 ADGRG2Q8IZP9 1017 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 ANKRD52Q8NB46 1076 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 SLC4A11Q8NBS3 891 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 SEMA4DQ92854 862 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 LOXL4Q96JB6 756 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 ZFYVE19Q96K21 471 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 CYP2S1Q96SQ9 504 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 KCNK16Q96T55 309 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 EBF3Q9H4W6 596 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 CISHQ9NSE2 258 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 PCMTD2Q9NV79 361 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 HMGXB4Q9UGU5 601 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 EBF1Q9UH73 591 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 ZNF510Q9Y2H8 683 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 CPQQ9Y646 472 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 MYO16Q9Y6X6 1858 aa6.66□□□□□ -1.34
SMG1-201ENST00000330588 GTPBP10A4D1E9 387 aaKnown RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 OTOL1A6NHN0 477 aaPredicted RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 XPO1O14980 1071 aaKnown RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 GSC2O15499 205 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 TLR5O60602 858 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 CYP17A1P05093 508 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 MBL2P11226 248 aaPredicted RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 RALAP11233 206 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 VDRP11473 427 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 SDHBP21912 280 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 BMP6P22004 513 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 ATP5C1P36542 298 aaKnown RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 OPRD1P41143 372 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 TNFRSF4P43489 277 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 MAPK8P45983 427 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 SOX9P48436 509 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 MAP3K7CLP57077 242 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 MRPS21P82921 87 aaKnown RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 ZXDBP98169 803 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 GAB4Q2WGN9 574 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 CBWD6Q4V339 395 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 CBWD3Q5JTY5 395 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 CBWD5Q5RIA9 395 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 TCERG1LQ5VWI1 586 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 PM20D1Q6GTS8 502 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 ENOSF1Q7L5Y1 443 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 C11orf74Q86VG3 221 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 ARMC10Q8N2F6 343 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 MLKLQ8NB16 471 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 LMO3Q8TAP4 145 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 NELFBQ8WX92 580 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 KCTD13Q8WZ19 329 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 NT5C1BQ96P26 610 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 TWNKQ96RR1 684 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 OLA1Q9NTK5 396 aaKnown RBP6.65□□□□□ -1.34
SMG1-201ENST00000330588 FAM49BQ9NUQ9 324 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMG1-201ENST00000330588 GMIPQ9P107 970 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 RWDD2AQ9UIY3 292 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 CNTN6Q9UQ52 1028 aa6.65□□□□□ -1.34
SMG1-201ENST00000330588 C5orf42Q9H799 3197 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 TRIM49BA6NDI0 452 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 EIF1AYO14602 144 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms