RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C1orf21Q9H246 121 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 CXCL16Q9H2A7 254 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 GTF2IRD1Q9UHL9 959 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 ANGPTL2Q9UKU9 493 aa15.83■□□□□ 0.12
BRCC3-201ENST00000330045 HTTP42858 3142 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 F5H423 210 aaPredicted RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 MLNP12872 115 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 FDFT1P37268 417 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 TUBP50607 506 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 UBAP2LQ14157 1087 aaKnown RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SOWAHAQ2M3V2 549 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 RIPOR1Q6ZS17 1223 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 CCDC185Q8N715 623 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 PIWIL2Q8TC59 973 aaKnown RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 UCMAQ8WVF2 138 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 CDKL2Q92772 493 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SIKE1Q9BRV8 207 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SORCS3Q9UPU3 1222 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SCN1AP35498 2009 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 A0A0A0MRY4 1105 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 GLRA3O75311 464 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 DGKIO75912 1065 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 ALDOAP04075 364 aaKnown RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 VAV1P15498 845 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 PEX19P40855 299 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 RPL10AP62906 217 aaKnown RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 CRADDP78560 199 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 NIPAL4Q0D2K0 466 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 ZNF792Q3KQV3 632 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 N4BP2L1Q5TBK1 243 aaPredicted RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 MBLAC2Q68D91 279 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 ARHGAP17Q68EM7 881 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 MTHFD1LQ6UB35 978 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 PACS1Q6VY07 963 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 APLFQ8IW19 511 aaPredicted RBP15.82■□□□□ 0.12
BRCC3-201ENST00000330045 COLGALT1Q8NBJ5 622 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 ATP2A3Q93084 1043 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SPATA13Q96N96 652 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 PANX3Q96QZ0 392 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 APOL6Q9BWW8 343 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 VCXQ9H320 206 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 DPEP3Q9H4B8 488 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 KRT82Q9NSB4 513 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 DLGAP2Q9P1A6 1054 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SLC17A6Q9P2U8 582 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 SLC7A8Q9UHI5 535 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 EMCNQ9ULC0 261 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 DNAJC16Q9Y2G8 782 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 MFHAS1Q9Y4C4 1052 aa15.82■□□□□ 0.12
BRCC3-201ENST00000330045 CCDC189A1A4V9 331 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 HACD1B0YJ81 288 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 ITM2AO43736 263 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 LYPLA1O75608 230 aaPredicted RBP15.81■□□□□ 0.12
BRCC3-201ENST00000330045 LCP1P13796 627 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 GOT1P17174 413 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 AOC1P19801 751 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 SLC1A6P48664 564 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 PSEN1P49768 467 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 HUNKP57058 714 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 ACTR3P61158 418 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 LRRC8BQ6P9F7 803 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 UNC93AQ86WB7 457 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 HACE1Q8IYU2 909 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 ZMAT2Q96NC0 199 aaKnown RBP15.81■□□□□ 0.12
BRCC3-201ENST00000330045 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 CPA4Q9UI42 421 aa15.81■□□□□ 0.12
BRCC3-201ENST00000330045 ASB14A6NK59 587 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 TPP1O14773 563 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 NPTXRO95502 500 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 FGF3P11487 239 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ARL4AP40617 200 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ADCYAP1R1P41586 468 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SESN2P58004 480 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 BST2Q10589 180 aaKnown RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 PDE1CQ14123 709 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 TEDDM1Q5T9Z0 273 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 C1orf146Q5VVC0 180 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 MAMDC4Q6UXC1 1216 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 PYROXD2Q8N2H3 581 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ZNF778Q96MU6 729 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 OLFM3Q96PB7 478 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 LGMNQ99538 433 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ZNF184Q99676 751 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 PLEKHA5Q9HAU0 1116 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 DCDC2Q9UHG0 476 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 DERAQ9Y315 318 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 PLIN3O60664 434 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ZNF286BP0CG31 522 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ANPEPP15144 967 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 KCNA4P22459 653 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SP100P23497 879 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ADORA2BP29275 332 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SCNN1AP37088 669 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 MYLK4Q86YV6 388 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 ANKRD52Q8NB46 1076 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SHCBP1Q8NEM2 672 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms