RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 USP46P62068 366 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 XRCC4Q13426 336 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 DPYSQ14117 519 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 TNFAIP8L3Q5GJ75 292 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 RELL1Q8IUW5 271 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 PPIL6Q8IXY8 311 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 NAT8LQ8N9F0 302 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 RTP4Q96DX8 246 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 OSER1Q9NX31 292 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 SFMBT1Q9UHJ3 866 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 NUDT5Q9UKK9 219 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 SHOC2Q9UQ13 582 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 CFAP69A5D8W1 941 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 ACSL3O95573 720 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 AGTP01019 485 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 TIMP1P01033 207 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 CSF2RAP15509 400 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 GAD2Q05329 585 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 NETO2Q8NC67 525 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 RNF34Q969K3 372 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 CHMP6Q96FZ7 201 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 PRDM16Q9HAZ2 1276 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 PRDM5Q9NQX1 630 aaPredicted RBP20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 NINJ2Q9NZG7 142 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 SNX10Q9Y5X0 201 aa20.94■□□□□ 0.94
RIPPLY3-201ENST00000329553 ABHD14A-ACY1A0A1B0GW23 586 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 TCRBV7S3A2A0A539 114 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 NDC80O14777 642 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 RGS16O15492 202 aaPredicted RBP20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 SLC45A4Q5BKX6 768 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 FAM117BQ6P1L5 589 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 MON1AQ86VX9 555 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CASP10Q92851 521 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 VN1R3Q9BXE9 311 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 FBXO44Q9H4M3 255 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 COL4A6Q14031 1691 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 GOLGA8MH3BSY2 632 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 MFSD11O43934 449 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CHN1P15882 459 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 MAGEA4P43358 317 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 LBX1P52954 281 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 DEFB103AP81534 67 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 MGAT5BQ3V5L5 792 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CCDC121Q6ZUS5 278 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CDKL3Q8IVW4 592 aaPredicted RBP20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CACNA2D3Q8IZS8 1091 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 SPPL2BQ8TCT7 592 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 ATXN2LQ8WWM7 1075 aaKnown RBP20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 IGSF21Q96ID5 467 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CABS1Q96KC9 395 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 C9orf72Q96LT7 481 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 OLFM3Q96PB7 478 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 ZNF317Q96PQ6 595 aaPredicted RBP20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 IL37Q9NZH6 218 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 CDY1Q9Y6F8 540 aa20.93■□□□□ 0.94
RIPPLY3-201ENST00000329553 MYO16Q9Y6X6 1858 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 TLDC2A0PJX2 215 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 DCLK1O15075 740 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 ADAM12O43184 909 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 IRAK2O43187 625 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 IFI35P80217 286 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 BASP1P80723 227 aaKnown RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 DUSP4Q13115 394 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 PKN2Q16513 984 aaKnown RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 GKAP1Q5VSY0 366 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 SMOC2Q9H3U7 446 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 SAYSD1Q9NPB0 183 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 OR12D3Q9UGF7 316 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 H0YHG0 523 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 ERCC2P18074 760 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 HCAR3P49019 387 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 SMARCB1Q12824 385 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 PAFAH1B3Q15102 231 aaKnown RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 USP41Q3LFD5 358 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 CPLX4Q7Z7G2 160 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 CCDC13Q8IYE1 715 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 RNF168Q8IYW5 571 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 FBXO22Q8NEZ5 403 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 ZNF689Q96CS4 500 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 QKIQ96PU8 341 aaKnown RBP eCLIP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 SEPT5Q99719 369 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 ACTR5Q9H9F9 607 aaPredicted RBP20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 PAK5Q9P286 719 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 NR2E3Q9Y5X4 410 aa20.92■□□□□ 0.94
RIPPLY3-201ENST00000329553 MSI1O43347 362 aaKnown RBP20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 TMEM63AO94886 807 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 HAPLN1P10915 354 aaPredicted RBP20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 RPL17P18621 184 aaKnown RBP20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 TPI1P60174 286 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 CEP128Q6ZU80 1094 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 DENND5BQ6ZUT9 1274 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 CCDC110Q8TBZ0 833 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 EPS8L3Q8TE67 593 aaKnown RBP20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 LGMNQ99538 433 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 OXCT2Q9BYC2 517 aaPredicted RBP20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 ARHGEF38Q9NXL2 777 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 GMIPQ9P107 970 aa20.91■□□□□ 0.94
RIPPLY3-201ENST00000329553 C1QTNF8P60827 252 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 FASTKD3Q14CZ7 662 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms