RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RFC1P35251 1148 aaPredicted RBP17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 FZD5Q13467 585 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 ZNF77Q15935 545 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 C2CD6Q53TS8 623 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 ODF2Q5BJF6 829 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 DCAF12L1Q5VU92 463 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 SNX30Q5VWJ9 437 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 OR6B2Q6IFH4 312 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 PMF1Q6P1K2 205 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 TPRG1Q6ZUI0 275 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 SLC13A5Q86YT5 568 aaPredicted RBP17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 ZNF687Q8N1G0 1237 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 KRT35Q92764 455 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 E2F7Q96AV8 911 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 SLITRK1Q96PX8 696 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 ARFGAP3Q9NP61 516 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 PNPLA8Q9NP80 782 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 NUDT5Q9UKK9 219 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 USP3Q9Y6I4 520 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 FRYLO94915 3013 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 COL4A2P08572 1712 aa17.08■□□□□ 0.32
PDLIM1-201ENST00000329399 TICRRQ7Z2Z1 1910 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 A0A1W2PQH9 124 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 E5RJQ4 531 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 USP17L7P0C7H9 530 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 RHOXF2BP0C7M4 288 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 AOC1P19801 751 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 GPD1P21695 349 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 CLCN5P51795 746 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 PFKPQ01813 784 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 DHX34Q14147 1143 aaKnown RBP17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 TMCO3Q6UWJ1 677 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 SLC26A9Q7LBE3 791 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 SUGP1Q8IWZ8 645 aaKnown RBP17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 IFT20Q8IY31 132 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 YAF2Q8IY57 180 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 TSC1Q92574 1164 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 IRF7Q92985 503 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 EBF3Q9H4W6 596 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 DLGAP2Q9P1A6 1054 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 STIM2Q9P246 746 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 SCML2Q9UQR0 700 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 CPQQ9Y646 472 aa17.07■□□□□ 0.32
PDLIM1-201ENST00000329399 KMT2EQ8IZD2 1858 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 C2CD4BA6NLJ0 364 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 LEFTY2O00292 366 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 PYGMP11217 842 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 PPP3CCP48454 512 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 SLC7A9P82251 487 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 CYP1B1Q16678 543 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 RAB41Q5JT25 222 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 OLFML1Q6UWY5 402 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 BHLHA9Q7RTU4 235 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 VSIG1Q86XK7 387 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 SCML4Q8N228 414 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 PRSS33Q8NF86 280 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 DNASE1L2Q92874 299 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 TRIM62Q9BVG3 475 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 TRIM7Q9C029 511 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 TRPV5Q9NQA5 729 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 METTL5Q9NRN9 209 aaKnown RBP17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 WNT6Q9Y6F9 365 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 PIAS3Q9Y6X2 628 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 PATJQ8NI35 1801 aa17.06■□□□□ 0.32
PDLIM1-201ENST00000329399 KANSL1LA0AUZ9 987 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FAM187AA6NFU0 413 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FAM170BA6NMN3 283 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PIK3R2O00459 728 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 MDM4O15151 490 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 TARSP26639 723 aaKnown RBP17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 GBP1P32455 592 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PTPN9P43378 593 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FNTAP49354 379 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 RGS7P49802 495 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 USP4Q13107 963 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FAM183BPQ6ZVS7 135 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PHLDB2Q86SQ0 1253 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 C12orf50Q8NA57 414 aaPredicted RBP17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 OVCA2Q8WZ82 227 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 LRRC1Q9BTT6 524 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FRMD8P1Q9BZ68 369 aaPredicted RBP17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FBXO44Q9H4M3 255 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 COMMD8Q9NX08 183 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 RRN3Q9NYV6 651 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 EHD2Q9NZN4 543 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 ZMYM5Q9UJ78 669 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 HSF2BPO75031 334 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PHF2O75151 1096 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PDGFRAP16234 1089 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 SDC4P31431 198 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms