RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CCDC88AQ3V6T2 1871 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 MADDQ8WXG6 1647 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ASB14A6NK59 587 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PSMD3O43242 534 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ZNF682O95780 498 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PROCP04070 461 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ITGA2BP08514 1039 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ADRA2BP18089 450 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 VAC14Q08AM6 782 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 SCFD2Q8WU76 684 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 THUMPD3Q9BV44 507 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 C12orf4Q9NQ89 552 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 NDFIP2Q9NV92 336 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 RAPGEFL1Q9UHV5 662 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 OVOS2A0A0J9YW53 1432 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 OVOS2Q6IE36 1432 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 GZMAP12544 262 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PDK4Q16654 411 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PIK3C3Q8NEB9 887 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 GPRC5AQ8NFJ5 357 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PIGUQ9H490 435 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ELOVL6Q9H5J4 265 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 AVENQ9NQS1 362 aaPredicted RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PIN4Q9Y237 131 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ANKRD6Q9Y2G4 727 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ABCA4P78363 2273 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 SDR42E2A6NKP2 422 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 AXIN1O15169 862 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 KCNQ2O43526 872 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TLR2O60603 784 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ABHD2P08910 425 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TKTP29401 623 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 CSE1LP55060 971 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 NFIXQ14938 502 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ZSWIM7Q19AV6 140 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM9CQ8IZT9 166 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 EID3Q8N140 333 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 DCUN1D1Q96GG9 259 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PCDH18Q9HCL0 1135 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 JPH1Q9HDC5 661 aaPredicted RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TUFT1Q9NNX1 390 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ZNF224Q9NZL3 707 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 VPS9D1Q9Y2B5 631 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TNS3Q68CZ2 1445 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 NRKQ7Z2Y5 1582 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TRPM6Q9BX84 2022 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 DYNC1LI2O43237 492 aaPredicted RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TXNP10599 105 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 IRF1P10914 325 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 FGFR3P22607 806 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 STIP1P31948 543 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 SSTR3P32745 418 aaPredicted RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 GSSP48637 474 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ENPEPQ07075 957 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 NME3Q13232 169 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 NAB1Q13506 487 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TAF5Q15542 800 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ZNF544Q6NX49 715 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 TMEM53Q6P2H8 277 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ZCCHC9Q8N567 271 aaKnown RBP5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 RNFT2Q96EX2 444 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 CDRT15Q96T59 188 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 PFDN2Q9UHV9 154 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 ARFGEF3Q5TH69 2177 aa5.5□□□□□ -1.53
SDR42E1-201ENST00000328945 HS6ST1O60243 411 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 MYL4P12829 197 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 TGFBR2P37173 567 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 RTP1P59025 263 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 C2CD6Q53TS8 623 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 SWSAP1Q6NVH7 229 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 CDC73Q6P1J9 531 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 KYAT3Q6YP21 454 aaKnown RBP5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 SLC44A5Q8NCS7 719 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 MTG1Q9BT17 334 aaPredicted RBP5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 PDCD10Q9BUL8 212 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 KIFC1Q9BW19 673 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 VAV3Q9UKW4 847 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 AGLP35573 1532 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 SHROOM3Q8TF72 1996 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 VPS4BO75351 444 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 SERPIND1P05546 499 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 ANXA6P08133 673 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 NFYCQ13952 458 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 KIZQ2M2Z5 673 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 GPR107Q5VW38 600 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 BICRALQ6AI39 1079 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 AMIGO2Q86SJ2 522 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 UNC45BQ8IWX7 931 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 SLC30A5Q8TAD4 765 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 TCP10LQ8TDR4 215 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 MTMR8Q96EF0 704 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 NAT9Q9BTE0 207 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM217BQ9NTX9 383 aaPredicted RBP5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 PCDHA6Q9UN73 950 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 PLCL2Q9UPR0 1127 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 PCDHA8Q9Y5H6 950 aa5.49□□□□□ -1.53
SDR42E1-201ENST00000328945 BAZ2AQ9UIF9 1905 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms