RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SNTG2Q9NY99 539 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 NUAK1O60285 661 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 MARCH6O60337 910 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 MMP10P09238 476 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 TGFB3P10600 412 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 ATF2P15336 505 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 IL32P24001 234 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 TNNI2P48788 182 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 DSTNP60981 165 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 COPZ1P61923 177 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 INSCQ1MX18 579 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 TRIM72Q6ZMU5 477 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 AKAP14Q86UN6 197 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 CPNE8Q86YQ8 564 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 VPS37AQ8NEZ2 397 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 ACDQ96AP0 544 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 INO80BQ9C086 356 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-201ENST00000328923 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 PACSIN3Q9UKS6 424 aa12.18□□□□□ -0.46
SHMT2-201ENST00000328923 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-201ENST00000328923 IDH3BO43837 385 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 SNX2O60749 519 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CSDE1O75534 798 aaKnown RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 PIAS1O75925 651 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 KRT6AP02538 564 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 KRT6BP04259 564 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CAPN1P07384 714 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 KITP10721 976 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 NPR1P16066 1061 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 PTGS2P35354 604 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 PSMC2P35998 433 aaKnown RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 GRIA3P42263 894 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 RACK1P63244 317 aaKnown RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 GPC5P78333 572 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 GALNT1Q10472 559 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 NRF1Q16656 503 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 LRIT3Q3SXY7 679 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CENPUQ71F23 418 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 TDRPQ86YL5 185 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 LILRA2Q8N149 483 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 BEND7Q8N7W2 519 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 RMDN1Q96DB5 314 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 C7orf26Q96N11 449 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 TMEM206Q9H813 350 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CHORDC1Q9UHD1 332 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 SLC27A5Q9Y2P5 690 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 B8ZZF3 427 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 hCG_2039718K7EN88 272 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 M0QX08 132 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 ERBB2P04626 1255 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 ALOX5P09917 674 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 COMTP21964 271 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 GNL1P36915 607 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 HSPA13P48723 471 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 FMO5P49326 533 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CASP4P49662 377 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 PDIA2Q13087 525 aaKnown RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 PEX6Q13608 980 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CCNG2Q16589 344 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 DENND5BQ6ZUT9 1274 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 C16orf86Q6ZW13 317 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CCDC89Q8N998 374 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 BBOF1Q8ND07 529 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 TTC17Q96AE7 1141 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CLSTN3Q9BQT9 956 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 SAYSD1Q9NPB0 183 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 CHST7Q9NS84 486 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 GIMAP4Q9NUV9 329 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 KCNK4Q9NYG8 393 aa12.17□□□□□ -0.46
SHMT2-201ENST00000328923 MARCOQ9UEW3 520 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-201ENST00000328923 ARHGEF37A1IGU5 675 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 FSCN2O14926 492 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 EIF3DO15371 548 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 KRT5P13647 590 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 M6PRP20645 277 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 TGM1P22735 817 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 MRPS22P82650 360 aaKnown RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 IFITM3Q01628 133 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 FASTKD3Q14CZ7 662 aaKnown RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 SNAP47Q5SQN1 464 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 PXDC1Q5TGL8 231 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 NEK5Q6P3R8 708 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 MAPKAPK5Q8IW41 473 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 DEFB107AQ8IZN7 70 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms