RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 IGBP1P78318 339 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 MYLK4Q86YV6 388 aaPredicted RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 TFB1MQ8WVM0 346 aaKnown RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 HTR3CQ8WXA8 447 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 ATP2A3Q93084 1043 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 DHX35Q9H5Z1 703 aaKnown RBP20.48■□□□□ 0.87
SOX2-201ENST00000325404 DTLQ9NZJ0 730 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 USP3Q9Y6I4 520 aa20.48■□□□□ 0.87
SOX2-201ENST00000325404 DPPA5A6NC42 116 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 MANSC4A6NHS7 340 aaPredicted RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 CSDE1O75534 798 aaKnown RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 KLHL2O95198 593 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 MYL4P12829 197 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 ACADSBP45954 432 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 FASTKD1Q53R41 847 aaKnown RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 MBLAC2Q68D91 279 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 ZNF410Q86VK4 478 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 PIWIL2Q8TC59 973 aaKnown RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 FAM161BQ96MY7 647 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 KCTD15Q96SI1 283 aaPredicted RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 GRK2P25098 689 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 SESN3P58005 492 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 BST2Q10589 180 aaKnown RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 ZBTB6Q15916 424 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 GSTA3Q16772 222 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 NCBP2-AS2Q69YL0 99 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 ANKRD52Q8NB46 1076 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 C20orf27Q9GZN8 174 aa20.47■□□□□ 0.87
SOX2-201ENST00000325404 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
SOX2-201ENST00000325404 SF3B1O75533 1304 aaKnown RBP eCLIP20.46■□□□□ 0.87
SOX2-201ENST00000325404 OPHN1O60890 802 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 SKAP2O75563 359 aaPredicted RBP20.46■□□□□ 0.87
SOX2-201ENST00000325404 PGAM1P18669 254 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 DUSP28Q4G0W2 176 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 MTHFD1LQ6UB35 978 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 ADGRG6Q86SQ4 1221 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 ULK2Q8IYT8 1036 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 NPLOC4Q8TAT6 608 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 SNX9Q9Y5X1 595 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 STK10O94804 968 aaKnown RBP20.46■□□□□ 0.87
SOX2-201ENST00000325404 BCAT1P54687 386 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 TMCO4Q5TGY1 634 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 CRYBG2Q8N1P7 616 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 HSFY1Q96LI6 401 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 ZNF184Q99676 751 aaPredicted RBP20.46■□□□□ 0.87
SOX2-201ENST00000325404 DNAI2Q9GZS0 605 aa20.46■□□□□ 0.87
SOX2-201ENST00000325404 CCDC195A0A1B0GUA6 201 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 PLIN3O60664 434 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 FKBP6O75344 327 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 MAP3K6O95382 1288 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 ZNF286BP0CG31 522 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 SMPD1P17405 629 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 TUBB3Q13509 450 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 TAF1CQ15572 869 aaPredicted RBP20.45■□□□□ 0.86
SOX2-201ENST00000325404 TEDDM1Q5T9Z0 273 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 AAGABQ6PD74 315 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 PACS1Q6VY07 963 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 PPP1R14CQ8TAE6 165 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 NLRP7Q8WX94 980 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 RILPQ96NA2 401 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 FERMT1Q9BQL6 677 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 ZNF395Q9H8N7 513 aaPredicted RBP20.45■□□□□ 0.86
SOX2-201ENST00000325404 EMCNQ9ULC0 261 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 SOX13Q9UN79 622 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.45■□□□□ 0.86
SOX2-201ENST00000325404 CCDC189A1A4V9 331 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 VTNP04004 478 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 SERPINE1P05121 402 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 PDHA1P08559 390 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 FGF3P11487 239 aaPredicted RBP20.45■□□□□ 0.86
SOX2-201ENST00000325404 ALOX15P16050 662 aaPredicted RBP20.45■□□□□ 0.86
SOX2-201ENST00000325404 AMPD1P23109 780 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 PSEN1P49768 467 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 AP2B1P63010 937 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 RABGAP1LQ5R372 815 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 TMEM154Q6P9G4 183 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 NR1H4Q96RI1 486 aaPredicted RBP20.45■□□□□ 0.86
SOX2-201ENST00000325404 B3GNT5Q9BYG0 378 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 KRT82Q9NSB4 513 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 FAM49BQ9NUQ9 324 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 NME7Q9Y5B8 376 aa20.45■□□□□ 0.86
SOX2-201ENST00000325404 CITO14578 2027 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 ALDOAP04075 364 aaKnown RBP20.44■□□□□ 0.86
SOX2-201ENST00000325404 TFE3P19532 575 aaPredicted RBP20.44■□□□□ 0.86
SOX2-201ENST00000325404 ARL4AP40617 200 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 GRIA1P42261 906 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 CPA2P48052 419 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 GLUD2P49448 558 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 IQSEC1Q6DN90 963 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 RIPOR1Q6ZS17 1223 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 BEST2Q8NFU1 509 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 SYT15Q9BQS2 421 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 C16orf70Q9BSU1 422 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 XPNPEP3Q9NQH7 507 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 DNAJC28Q9NX36 388 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.44■□□□□ 0.86
SOX2-201ENST00000325404 RALGAPA2Q2PPJ7 1873 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 WDR27A2RRH5 827 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 DCAF8L1A6NGE4 600 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms