RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.02■□□□□ 0.64
USP39-201ENST00000323701 ERICH4A6NGS2 130 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 PAGE1O75459 146 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 SRGAP2BP0DMP2 458 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 PAFAH1B3Q15102 231 aaKnown RBP19.02■□□□□ 0.63
USP39-201ENST00000323701 SPATA17Q96L03 361 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 WDR83Q9BRX9 315 aaKnown RBP19.02■□□□□ 0.63
USP39-201ENST00000323701 CEP41Q9BYV8 373 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 CENPHQ9H3R5 247 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 CXXC1Q9P0U4 656 aaPredicted RBP19.02■□□□□ 0.63
USP39-201ENST00000323701 ADAM21Q9UKJ8 722 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 SHOC2Q9UQ13 582 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 BACE2Q9Y5Z0 518 aa19.02■□□□□ 0.63
USP39-201ENST00000323701 TTC4O95801 387 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 MOCS2O96007 188 aaPredicted RBP19.01■□□□□ 0.63
USP39-201ENST00000323701 XRCC4Q13426 336 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 PPIL6Q8IXY8 311 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 TMEM169Q96HH4 297 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 TRIM62Q9BVG3 475 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 PRDM12Q9H4Q4 367 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 SAYSD1Q9NPB0 183 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 MAGED2Q9UNF1 606 aaPredicted RBP19.01■□□□□ 0.63
USP39-201ENST00000323701 ALPK3Q96L96 1907 aa19.01■□□□□ 0.63
USP39-201ENST00000323701 KCNU1A8MYU2 1149 aa19■□□□□ 0.63
USP39-201ENST00000323701 METTL18O95568 372 aa19■□□□□ 0.63
USP39-201ENST00000323701 LINC00271P0C7V0 271 aa19■□□□□ 0.63
USP39-201ENST00000323701 DNAJB2P25686 324 aa19■□□□□ 0.63
USP39-201ENST00000323701 EPHB2P29323 1055 aa19■□□□□ 0.63
USP39-201ENST00000323701 DSG1Q02413 1049 aa19■□□□□ 0.63
USP39-201ENST00000323701 EFEMP1Q12805 493 aa19■□□□□ 0.63
USP39-201ENST00000323701 TRMT10CQ7L0Y3 403 aaKnown RBP19■□□□□ 0.63
USP39-201ENST00000323701 GOLGA6L1Q8N7Z2 621 aa19■□□□□ 0.63
USP39-201ENST00000323701 YME1L1Q96TA2 773 aa19■□□□□ 0.63
USP39-201ENST00000323701 IL23AQ9NPF7 189 aa19■□□□□ 0.63
USP39-201ENST00000323701 RAB6BQ9NRW1 208 aa19■□□□□ 0.63
USP39-201ENST00000323701 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19■□□□□ 0.63
USP39-201ENST00000323701 MYO18AQ92614 2054 aaKnown RBP19■□□□□ 0.63
USP39-201ENST00000323701 GOLGA6CA6NDK9 693 aa19■□□□□ 0.63
USP39-201ENST00000323701 SLC38A8A6NNN8 435 aa19■□□□□ 0.63
USP39-201ENST00000323701 GOLGA8KD6RF30 607 aa19■□□□□ 0.63
USP39-201ENST00000323701 F5H423 210 aaPredicted RBP19■□□□□ 0.63
USP39-201ENST00000323701 GOLGA6DP0CG33 693 aa19■□□□□ 0.63
USP39-201ENST00000323701 CCR1P32246 355 aa19■□□□□ 0.63
USP39-201ENST00000323701 MAGEA4P43358 317 aa19■□□□□ 0.63
USP39-201ENST00000323701 HCAR3P49019 387 aa19■□□□□ 0.63
USP39-201ENST00000323701 KCNJ11Q14654 390 aa19■□□□□ 0.63
USP39-201ENST00000323701 DNAJC21Q5F1R6 531 aaKnown RBP19■□□□□ 0.63
USP39-201ENST00000323701 MSANTD2Q6P1R3 559 aa19■□□□□ 0.63
USP39-201ENST00000323701 C14orf80Q86SX3 495 aa19■□□□□ 0.63
USP39-201ENST00000323701 CDKL3Q8IVW4 592 aaPredicted RBP19■□□□□ 0.63
USP39-201ENST00000323701 CCDC13Q8IYE1 715 aa19■□□□□ 0.63
USP39-201ENST00000323701 CMTR2Q8IYT2 770 aaKnown RBP19■□□□□ 0.63
USP39-201ENST00000323701 EPS8L3Q8TE67 593 aaKnown RBP19■□□□□ 0.63
USP39-201ENST00000323701 BADQ92934 168 aa19■□□□□ 0.63
USP39-201ENST00000323701 CCSER2Q9H7U1 834 aa19■□□□□ 0.63
USP39-201ENST00000323701 GOLGA6AQ9NYA3 693 aa19■□□□□ 0.63
USP39-201ENST00000323701 KIAA1671Q9BY89 1806 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 SMIM23A6NLE4 172 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 ZBBXA8MT70 800 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 ABLIM3O94929 683 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 PPARDQ03181 441 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 IFFO1Q0D2I5 559 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 SMARCB1Q12824 385 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 PRKD1Q15139 912 aaPredicted RBP18.99■□□□□ 0.63
USP39-201ENST00000323701 KRT71Q3SY84 523 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 MIB1Q86YT6 1006 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 RELL1Q8IUW5 271 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 DEPDC1BQ8WUY9 529 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 TFB1MQ8WVM0 346 aaKnown RBP18.99■□□□□ 0.63
USP39-201ENST00000323701 SLC39A13Q96H72 371 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 FCRL2Q96LA5 508 aaPredicted RBP18.99■□□□□ 0.63
USP39-201ENST00000323701 OSBPL2Q9H1P3 480 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.99■□□□□ 0.63
USP39-201ENST00000323701 AVILO75366 819 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 RTN3O95197 1032 aaPredicted RBP18.99■□□□□ 0.63
USP39-201ENST00000323701 MYZAPP0CAP1 466 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 SLCO1A2P46721 670 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 GLUD2P49448 558 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 AP1B1Q10567 949 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 SKIDA1Q1XH10 827 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 AGGF1Q8N302 714 aaeCLIP18.99■□□□□ 0.63
USP39-201ENST00000323701 ZNF461Q8TAF7 563 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 C2orf15Q8WU43 125 aaKnown RBP18.99■□□□□ 0.63
USP39-201ENST00000323701 HTR3CQ8WXA8 447 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 P2RY11Q96G91 374 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 ATP6V1G3Q96LB4 118 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 KLC2Q9H0B6 622 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 ETNK1Q9HBU6 452 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 NDFIP2Q9NV92 336 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 SPG21Q9NZD8 308 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 HS3ST4Q9Y661 456 aa18.99■□□□□ 0.63
USP39-201ENST00000323701 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.98■□□□□ 0.63
USP39-201ENST00000323701 CFAP69A5D8W1 941 aa18.98■□□□□ 0.63
USP39-201ENST00000323701 PDIA2Q13087 525 aaKnown RBP18.98■□□□□ 0.63
USP39-201ENST00000323701 BRMS1LQ5PSV4 323 aa18.98■□□□□ 0.63
USP39-201ENST00000323701 PIK3R6Q5UE93 754 aa18.98■□□□□ 0.63
USP39-201ENST00000323701 MANEALQ5VSG8 457 aa18.98■□□□□ 0.63
USP39-201ENST00000323701 HEATR6Q6AI08 1181 aaKnown RBP18.98■□□□□ 0.63
USP39-201ENST00000323701 RWDD4Q6NW29 188 aaKnown RBP18.98■□□□□ 0.63
USP39-201ENST00000323701 ANKMY2Q8IV38 441 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms