RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SPATA13Q96N96 652 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 KCNK4Q9NYG8 393 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 SIRPGQ9P1W8 387 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 TPSB2P20231 275 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 CRHR1P34998 444 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 SEMA5AQ13591 1074 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 TPSAB1Q15661 275 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 SPDYAQ5MJ70 313 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 ARHGAP17Q68EM7 881 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 PID1Q7Z2X4 250 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
COL9A1-201ENST00000320755 LRRC52Q8N7C0 313 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 CENPIQ92674 756 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-201ENST00000320755 STMN2Q93045 179 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 MTBPQ96DY7 904 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 PRDM12Q9H4Q4 367 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 UBQLN1Q9UMX0 589 aaKnown RBP17.93■□□□□ 0.46
COL9A1-201ENST00000320755 KLF11O14901 512 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 RARBP10826 455 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 RBM15BQ8NDT2 890 aaKnown RBP17.93■□□□□ 0.46
COL9A1-201ENST00000320755 C7orf26Q96N11 449 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 MED10Q9BTT4 135 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 C11orf84Q9BUA3 381 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-201ENST00000320755 SHCBP1LQ9BZQ2 653 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 ZNF358Q9NW07 568 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 MOCS1Q9NZB8 636 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 TXNDC16Q9P2K2 825 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 COL1A2P08123 1366 aa17.93■□□□□ 0.46
COL9A1-201ENST00000320755 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-201ENST00000320755 PRR5-ARHGAP8B1AHC4 643 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 HUS1O60921 280 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 GPR32O75388 356 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 ALDOAP04075 364 aaKnown RBP17.92■□□□□ 0.46
COL9A1-201ENST00000320755 MATKP42679 507 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 ARHGAP8P85298 464 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 TEX44Q53QW1 395 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 HFE2Q6ZVN8 426 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 SHCBP1Q8NEM2 672 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 RNF139Q8WU17 664 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 THTPAQ9BU02 230 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 WWP1Q9H0M0 922 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 XPNPEP3Q9NQH7 507 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 SYBUQ9NX95 663 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 CCNFP41002 786 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 ENDOVQ8N8Q3 282 aaKnown RBP17.92■□□□□ 0.46
COL9A1-201ENST00000320755 DNAJC16Q9Y2G8 782 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 HBS1LQ9Y450 684 aaKnown RBP17.92■□□□□ 0.46
COL9A1-201ENST00000320755 CCDC78A2IDD5 438 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 MEI4A8MW99 385 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 SERPINB9P50453 376 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 PDE1CQ14123 709 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-201ENST00000320755 KRT72Q14CN4 511 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 RSPH3Q86UC2 560 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 DNAJC9Q8WXX5 260 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 CDKL2Q92772 493 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 SPDL1Q96EA4 605 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 LRRC4Q9HBW1 653 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 FZD10Q9ULW2 581 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 RPS6KL1Q9Y6S9 549 aa17.92■□□□□ 0.46
COL9A1-201ENST00000320755 STK10O94804 968 aaKnown RBP17.91■□□□□ 0.46
COL9A1-201ENST00000320755 SMIM10L2AP0DMW4 78 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 SMIM10L2BP0DMW5 78 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 PPP2R5DQ14738 602 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 EFHC1Q5JVL4 640 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 SNX30Q5VWJ9 437 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 PACS1Q6VY07 963 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 OSTM1Q86WC4 334 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 CRYBG2Q8N1P7 616 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 POU5F2Q8N7G0 328 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 APOL2Q9BQE5 337 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 ZFATQ9P243 1243 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 LRRC42Q9Y546 428 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 TIMM13Q9Y5L4 95 aaPredicted RBP17.91■□□□□ 0.46
COL9A1-201ENST00000320755 TBX10O75333 385 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 DGKIO75912 1065 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 TYK2P29597 1187 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 TAF6P49848 677 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 CCNG1P51959 295 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 MAP3K7CLP57077 242 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 IFRD2Q12894 506 aaPredicted RBP17.91■□□□□ 0.46
COL9A1-201ENST00000320755 SLC25A52Q3SY17 297 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 C4orf22Q6V702 233 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 CMC1Q7Z7K0 106 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL9A1-201ENST00000320755 SLC25A41Q8N5S1 370 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 B3GALNT2Q8NCR0 500 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 AZIN2Q96A70 460 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 STOML1Q9UBI4 398 aa17.91■□□□□ 0.46
COL9A1-201ENST00000320755 FAM72CH0Y354 149 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 PIRO00625 290 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 DARSP14868 501 aaKnown RBP17.9■□□□□ 0.46
COL9A1-201ENST00000320755 FAM72AQ5TYM5 149 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 FAM72DQ6L9T8 149 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 RASSF3Q86WH2 238 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 FAM72BQ86X60 149 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ZNF567Q8N184 647 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 SIX6OS1Q8N1H7 587 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms