RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MAFO75444 373 aaPredicted RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 GUCA1CO95843 209 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 PPARGP37231 505 aaPredicted RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SLC26A2P50443 739 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 ACVR2BQ13705 512 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 CTXN3Q4LDR2 81 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 FBXO48Q5FWF7 155 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TRABD2AQ86V40 505 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 CACUL1Q86Y37 369 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 KLRG1Q96E93 195 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 CCT7Q99832 543 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SEMA6AQ9H2E6 1030 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 MROH7Q68CQ1 1323 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SMAPO00193 183 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TM9SF1O15321 606 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TBC1D12O60347 775 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 KATNA1O75449 491 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 ODC1P11926 461 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 GDF10P55107 478 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 MRPS22P82650 360 aaKnown RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SCIMPQ6UWF3 145 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 PYROXD2Q8N2H3 581 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 RASGEF1CQ8N431 466 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 CDRT15Q96T59 188 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 OR12D3Q9UGF7 316 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 DCDC2Q9UHG0 476 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TAGLN3Q9UI15 199 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TELO2Q9Y4R8 837 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 H0Y626 953 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 ZSCAN9O15535 394 aaPredicted RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 HNRNPCL1O60812 293 aaKnown RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 ANXA9O76027 345 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SRP72O76094 671 aaKnown RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TRIM16O95361 564 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 PIGNO95427 931 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 ASMTLO95671 621 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 TNFRSF8P28908 595 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 DRG2P55039 364 aaKnown RBP16.89■□□□□ 0.29
CLIP4-201ENST00000320081 C16orf87Q6PH81 154 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 BBS12Q6ZW61 710 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 ZNF786Q8N393 782 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 VPS50Q96JG6 964 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SEPHS2Q99611 448 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 BTBD10Q9BSF8 475 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 MRIQ9BWK5 157 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 NRDE2Q9H7Z3 1164 aa16.89■□□□□ 0.29
CLIP4-201ENST00000320081 SAC3D1A6NKF1 404 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 TRDMT1O14717 391 aaKnown RBP16.88■□□□□ 0.29
CLIP4-201ENST00000320081 UNC5CO95185 931 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 FKBP9O95302 570 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 SERPINB8P50452 374 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 POU4F1Q01851 419 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 FKBP9P1Q75LS8 142 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 C1orf127Q8N9H9 656 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 SNED1Q8TER0 1413 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 BTBD7Q9P203 1132 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 NALCNQ8IZF0 1738 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 ZNF143P52747 638 aaPredicted RBP16.88■□□□□ 0.29
CLIP4-201ENST00000320081 PTK2BQ14289 1009 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 THAP11Q96EK4 314 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 AK5Q9Y6K8 562 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 BTNL10A8MVZ5 291 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 GAD2Q05329 585 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 PEX6Q13608 980 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 FNBP1LQ5T0N5 605 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 OTUD3Q5T2D3 398 aaPredicted RBP16.88■□□□□ 0.29
CLIP4-201ENST00000320081 GRHL1Q9NZI5 618 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 RPTORQ8N122 1335 aa16.88■□□□□ 0.29
CLIP4-201ENST00000320081 TIMM44O43615 452 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 C4BPAP04003 597 aaKnown RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 CKMP06732 381 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 ERCC2P18074 760 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 EPHA3P29320 983 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 DSG1Q02413 1049 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 GTF2H3Q13889 308 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 PHF13Q86YI8 300 aaPredicted RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 CNPY4Q8N129 248 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 ZNF516Q92618 1163 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 ABHD16BQ9H3Z7 469 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 HMGXB4Q9UGU5 601 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 CCL22O00626 93 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 HARS2P49590 506 aaKnown RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 MRPS35P82673 323 aaKnown RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 SH3KBP1Q96B97 665 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 ELOVL4Q9GZR5 314 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 TRIM13O60858 407 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 LTFP02788 710 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 PAEPP09466 180 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 NELFEP18615 380 aaKnown RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 NCALDP61601 193 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 CYLC2Q14093 348 aaPredicted RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 PPM1JQ5JR12 505 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 FRMD8Q9BZ67 464 aaPredicted RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 TRIM15Q9C019 465 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 DMAC2Q9NW81 257 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 ARHGAP28Q9P2N2 729 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms