RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CPP00450 1065 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 CKBP12277 381 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 ERCC2P18074 760 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 TAC1P20366 129 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 FAAP100Q0VG06 881 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PDK1Q15118 436 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SEPT7Q16181 437 aaKnown RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 TRIM71Q2Q1W2 868 aaKnown RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 ARL13BQ3SXY8 428 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 ZNF534Q76KX8 674 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 LRRC6Q86X45 466 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PARP9Q8IXQ6 854 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PDCD7Q8N8D1 485 aaKnown RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 COLGALT1Q8NBJ5 622 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 MCUQ8NE86 351 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SCAMP5Q8TAC9 235 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SLC44A1Q8WWI5 657 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 CCT6BQ92526 530 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SPATA13Q96N96 652 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 FERMT1Q9BQL6 677 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PITPNM3Q9BZ71 974 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 C12orf65Q9H3J6 166 aaKnown RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 DMAP1Q9NPF5 467 aaPredicted RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 SRRDQ9UH36 339 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 FBXW11Q9UKB1 542 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 GRID1Q9ULK0 1009 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 CAPN7Q9Y6W3 813 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 IQANK1A0A1B0GTG1 560 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 CCT8L1PA6NM43 557 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 HACD1B0YJ81 288 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 C9IYK1 514 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 M0QZQ0 153 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 DNM1LO00429 736 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TRPA1O75762 1119 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 STK10O94804 968 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 MT-ND3P03897 115 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 CYP11A1P05108 521 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SLC18A1P54219 525 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TPI1P60174 286 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SEMA5AQ13591 1074 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 DPYSQ14117 519 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 ITIH4Q14624 930 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 HHATQ5VTY9 493 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 CASC4Q6P4E1 433 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 DCLRE1AQ6PJP8 1040 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 LVRNQ6Q4G3 990 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 GLB1LQ6UWU2 654 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 BHLHA9Q7RTU4 235 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 RTN4RL1Q86UN2 441 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 ZNF280BQ86YH2 543 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 THEM5Q8N1Q8 247 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 MZB1Q8WU39 189 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 RNF34Q969K3 372 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SIGLEC10Q96LC7 697 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TKTL2Q9H0I9 626 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PLAC1Q9HBJ0 212 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 OR12D3Q9UGF7 316 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 DSEQ9UL01 958 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 USP15Q9Y4E8 981 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 WDR91A4D1P6 747 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 CXorf49A8MYA2 514 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 PPP1R12AO14974 1030 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 DCLK1O15075 740 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 OR4Q2P0C623 313 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SKIP12755 728 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TPSB2P20231 275 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 EPHB2P29323 1055 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 MAGEA3P43357 314 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 CRADDP78560 199 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SARNPP82979 210 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 YWHAHQ04917 246 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 TPSAB1Q15661 275 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TRMT10BQ6PF06 316 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 UNC5AQ6ZN44 842 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PID1Q7Z2X4 250 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SPATA21Q7Z572 469 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 ZNF598Q86UK7 904 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 CD99L2Q8TCZ2 262 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 RAET1EQ8TD07 263 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TCP10LQ8TDR4 215 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 NTAN1Q96AB6 310 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 LRRC39Q96DD0 335 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 THOC1Q96FV9 657 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 EBNA1BP2Q99848 306 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 SLCO1B3Q9NPD5 702 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TTLL3Q9Y4R7 772 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SNX10Q9Y5X0 201 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PDCD11Q14690 1871 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 HGSO14964 777 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 B4GALT3O60512 393 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 CABYRO75952 493 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 DDHD2O94830 711 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SUN1O94901 812 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 F9P00740 461 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 APOEP02649 317 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 C1QAP02745 245 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 ADRA1DP25100 572 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 GRIK1P39086 918 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 GLUD2P49448 558 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms