RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 FAM172AQ8WUF8 416 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 INO80BQ9C086 356 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 IGSF9Q9P2J2 1179 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 SUFUQ9UMX1 484 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 LRP4O75096 1905 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 FAM92AA1XBS5 289 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 TNFRSF10BO14763 440 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 LPXNO60711 386 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 PRSS23O95084 383 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 CALB1P05937 261 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 SMPD1P17405 629 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 LRPAP1P30533 357 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 ELK3P41970 407 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 HCAR3P49019 387 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 BPIFB4P59827 614 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 CCNA1P78396 465 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 PURAQ00577 322 aaKnown RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 LY6KQ17RY6 165 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 SH2D4BQ5SQS7 431 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 IER5Q5VY09 327 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 FAM219BQ5XKK7 198 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 STXBP4Q6ZWJ1 553 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 OTUD6AQ7L8S5 288 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 NLRP9Q7RTR0 991 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 HERC6Q8IVU3 1022 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 PLD6Q8N2A8 252 aaKnown RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 RBM15BQ8NDT2 890 aaKnown RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 IRGQQ8WZA9 623 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 ACSF2Q96CM8 615 aaPredicted RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 PGLYRP2Q96PD5 576 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 RANBP9Q96S59 729 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 KLHL11Q9NVR0 708 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 ASNSD1Q9NWL6 643 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 USP18Q9UMW8 372 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 PTGESO14684 152 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 SERPINA6P08185 405 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 MCF2P10911 925 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 ARF4P18085 180 aaPredicted RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 PRDX6P30041 224 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 SLC8A1P32418 973 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 ATXN1P54253 815 aaKnown RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 C5orf22Q49AR2 442 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 LRRC8BQ6P9F7 803 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 LVRNQ6Q4G3 990 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 SLC39A5Q6ZMH5 540 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 VPS36Q86VN1 386 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 TANKQ92844 425 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 EBNA1BP2Q99848 306 aaKnown RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 LPIN3Q9BQK8 851 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 HEMGNQ9BXL5 484 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 MRPL47Q9HD33 250 aaKnown RBP8.09□□□□□ -1.11
CNOT4-201ENST00000315544 EXOC7Q9UPT5 735 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 HES2Q9Y543 173 aa8.09□□□□□ -1.11
CNOT4-201ENST00000315544 ASPDHA6ND91 283 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 FAM72CH0Y354 149 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 TFAP2AP05549 437 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 PABPC4LP0CB38 370 aaKnown RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 NRG1Q02297 640 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 SNX1Q13596 522 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 LRRC26Q2I0M4 334 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 ZNF618Q5T7W0 954 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 FAM102BQ5T8I3 360 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 FAM72AQ5TYM5 149 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 LAIR2Q6ISS4 152 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 FAM72DQ6L9T8 149 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 BORAQ6PGQ7 559 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 TMEM270Q6UE05 265 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 PPP1R21Q6ZMI0 780 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 NET1Q7Z628 596 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 MTDHQ86UE4 582 aaKnown RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 FAM72BQ86X60 149 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 CCDC185Q8N715 623 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 TMEM176AQ96HP8 235 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 NAF1Q96HR8 494 aaKnown RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 PRICKLE1Q96MT3 831 aaPredicted RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 MECRQ9BV79 373 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 SLC13A1Q9BZW2 595 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 ABHD16BQ9H3Z7 469 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 ZNF302Q9NR11 478 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 DUS2Q9NX74 493 aaKnown RBP8.09□□□□□ -1.12
CNOT4-201ENST00000315544 SLC17A6Q9P2U8 582 aa8.09□□□□□ -1.12
CNOT4-201ENST00000315544 PI4K2BG5E9Z4 385 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ATP5HO75947 161 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 RFC2P35250 354 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 INHBCP55103 352 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 MYO1EQ12965 1108 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 RFTN1Q14699 578 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 INSCQ1MX18 579 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 SEL1L2Q5TEA6 688 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 HMBOX1Q6NT76 420 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 C16orf59Q7L2K0 433 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 NT5DC4Q86YG4 428 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 MARVELD2Q8N4S9 558 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 MRPL45Q9BRJ2 306 aaKnown RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ASB7Q9H672 318 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 CNOT11Q9UKZ1 510 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms