RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 UNKQ9C0B0 810 aaKnown RBP14□□□□□ -0.17
CLCN6-201ENST00000312413 RRN3Q9NYV6 651 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 GGA2Q9UJY4 613 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 ARIH1Q9Y4X5 557 aaPredicted RBP14□□□□□ -0.17
CLCN6-201ENST00000312413 RRN3P2A6NIE6 340 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 CD3EAPO15446 510 aaKnown RBP14□□□□□ -0.17
CLCN6-201ENST00000312413 ROR2Q01974 943 aaKnown RBP14□□□□□ -0.17
CLCN6-201ENST00000312413 DNAAF5Q86Y56 855 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 ACTRT2Q8TDY3 377 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 POP1Q99575 1024 aaKnown RBP14□□□□□ -0.17
CLCN6-201ENST00000312413 GGA3Q9NZ52 723 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 SORCS3Q9UPU3 1222 aa14□□□□□ -0.17
CLCN6-201ENST00000312413 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 C6orf222P0C671 652 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PABPC1P11940 636 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CYP24A1Q07973 514 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 FAAP100Q0VG06 881 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 STX4Q12846 297 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 EPS8Q12929 822 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ZSWIM7Q19AV6 140 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 MACC1Q6ZN28 852 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ZNF605Q86T29 641 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 KCNMB4Q86W47 210 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CAPSLQ8WWF8 208 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CKAP2Q8WWK9 683 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 NARS2Q96I59 477 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TAAR1Q96RJ0 339 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 MID1IP1Q9NPA3 183 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 MIEF1Q9NQG6 463 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ATP6V1HQ9UI12 483 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ANKRD6Q9Y2G4 727 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 COMMD3-BMI1R4GMX3 469 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 AFF2P51816 1311 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 FBXO21O94952 628 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 OXCT1P55809 520 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ILF2Q12905 390 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 MPZL3Q6UWV2 235 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 KIAA0408Q6ZU52 694 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CDK20Q8IZL9 346 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 C8orf59Q8N0T1 100 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 STON1Q9Y6Q2 735 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PRR23AA6NEV1 266 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 VPS4BO75351 444 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PAICSP22234 425 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TCF7P36402 384 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ALDH1A3P47895 512 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PTDSS1P48651 473 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PTPN11Q06124 597 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TBX2Q13207 712 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 FRG1Q14331 258 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TTMPQ5BVD1 217 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 MARK2Q7KZI7 788 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 KRT74Q7RTS7 529 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 NT5DC3Q86UY8 548 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CACTIN-AS1Q8N1I8 211 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 FBXO39Q8N4B4 442 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 UBP1Q9NZI7 540 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ZNF624Q9P2J8 865 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PCNAP12004 261 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 GUCA1AP43080 201 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CSNK2BP67870 215 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 SLC20A2Q08357 652 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 NRF1Q16656 503 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 SPANXN3Q5MJ09 141 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ZCCHC23Q6ZST2 131 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 NET1Q7Z628 596 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CHST13Q8NET6 341 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 BHLHE22Q8NFJ8 381 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
CLCN6-201ENST00000312413 KLHL1Q9NR64 748 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ADPRHL2Q9NX46 363 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TRPC4Q9UBN4 977 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 SF3B1O75533 1304 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■■■ 93.8
CLCN6-201ENST00000312413 WDR27A2RRH5 827 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 H7C0S8 307 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ITGAXP20702 1163 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 PKNOX1P55347 436 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 ILDR2Q71H61 639 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TMEM176AQ96HP8 235 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 TBCBQ99426 244 aa13.99□□□□□ -0.17
CLCN6-201ENST00000312413 CRB1P82279 1406 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 H3BN98 237 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 NR1H2P55055 460 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 POU6F1Q14863 301 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 ANKS6Q68DC2 871 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 CDC73Q6P1J9 531 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 TSPAN14Q8NG11 270 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 TSEN34Q9BSV6 310 aaKnown RBP13.98□□□□□ -0.17
CLCN6-201ENST00000312413 LRMDAQ9H2I8 198 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 CYP3A43Q9HB55 503 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 SYNCRIPO60506 623 aaKnown RBP13.98□□□□□ -0.17
CLCN6-201ENST00000312413 TSPAN19P0C672 248 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 DSG3P32926 999 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 PRKCQQ04759 706 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 GRIK3Q13003 919 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 DGCR6Q14129 220 aa13.98□□□□□ -0.17
CLCN6-201ENST00000312413 MIB1Q86YT6 1006 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms