RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 CDK16Q00536 496 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 CASC4Q6P4E1 433 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 HACE1Q8IYU2 909 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 NDUFAF2Q8N183 169 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 SKA1Q96BD8 255 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 FBXO6Q9NRD1 293 aaPredicted RBP20.38■□□□□ 0.85
LRFN4-201ENST00000309602 SEPT10Q9P0V9 454 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 STAP1Q9ULZ2 295 aa20.38■□□□□ 0.85
LRFN4-201ENST00000309602 MTO1Q9Y2Z2 717 aaKnown RBP20.38■□□□□ 0.85
LRFN4-201ENST00000309602 NRP1O14786 923 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 OPHN1O60890 802 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 TOP3BO95985 862 aaKnown RBP20.37■□□□□ 0.85
LRFN4-201ENST00000309602 GLUD2P49448 558 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 SERPINB9P50453 376 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 TKTL1P51854 596 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 SESN2P58004 480 aaPredicted RBP20.37■□□□□ 0.85
LRFN4-201ENST00000309602 DEUP1Q05D60 604 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 LRRC8BQ6P9F7 803 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 WNT8BQ93098 351 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 PRDM12Q9H4Q4 367 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 CRTAC1Q9NQ79 661 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 KRT82Q9NSB4 513 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 LNPEPQ9UIQ6 1025 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 WFS1O76024 890 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 ALDH1A2O94788 518 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 HAUS5O94927 633 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 ANP32DO95626 131 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 FYNP06241 537 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 RARBP10826 455 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 MGAT1P26572 445 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 PSMB4P28070 264 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 PTPN4P29074 926 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 BST1Q10588 318 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 WASHC5Q12768 1159 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 IRF5Q13568 498 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 DPYSQ14117 519 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 CYS1Q717R9 158 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 CCNYQ8ND76 341 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 FAM13CQ8NE31 585 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 AP5M1Q9H0R1 490 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 PRDM16Q9HAZ2 1276 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 ARL8BQ9NVJ2 186 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 SIRPGQ9P1W8 387 aa20.37■□□□□ 0.85
LRFN4-201ENST00000309602 CCDC195A0A1B0GUA6 201 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 FAM237BA0A1B0GVD1 139 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 SDR42E2A6NKP2 422 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 CAPN15O75808 1086 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 STK10O94804 968 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 MYL2P10916 166 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 PDK1Q15118 436 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 RFX8Q6ZV50 586 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 NME8Q8N427 588 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 ADAM32Q8TC27 787 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 ARNTL2Q8WYA1 636 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 E2F7Q96AV8 911 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 ULBP1Q9BZM6 244 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 EIF2B3Q9NR50 452 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 DDX43Q9NXZ2 648 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 SF3B1O75533 1304 aaKnown RBP eCLIP20.36■□□□□ 0.851e-8■■■■■ 160.4
LRFN4-201ENST00000309602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 FAM72CH0Y354 149 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 EEF2KO00418 725 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 DNAJC6O75061 913 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 CELF2O95319 508 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 FAM200BP0CF97 657 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 CRHR1P34998 444 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 TMPRSS15P98073 1019 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 NIPAL4Q0D2K0 466 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 PAFAH1B3Q15102 231 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 CHI3L2Q15782 390 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 FAM72AQ5TYM5 149 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 BSPRYQ5W0U4 402 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 FAM72DQ6L9T8 149 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 MARK2Q7KZI7 788 aaKnown RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 FAM72BQ86X60 149 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 ZNF567Q8N184 647 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 C2orf69Q8N8R5 385 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 SENP8Q96LD8 212 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 TSPYL2Q9H2G4 693 aaPredicted RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 ZNF395Q9H8N7 513 aaPredicted RBP20.36■□□□□ 0.85
LRFN4-201ENST00000309602 ANLNQ9NQW6 1124 aa20.36■□□□□ 0.85
LRFN4-201ENST00000309602 TSC2P49815 1807 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 DCLK1O15075 740 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 CYP2B6P20813 491 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 HOXC8P31273 242 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 AFF1P51825 1210 aaKnown RBP20.35■□□□□ 0.85
LRFN4-201ENST00000309602 ZBTB16Q05516 673 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 TEX44Q53QW1 395 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 TIFABQ6ZNK6 161 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 NUDCD3Q8IVD9 361 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 TRIM42Q8IWZ5 723 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 GSTCDQ8NEC7 633 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 SLC7A14Q8TBB6 771 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 PTCD3Q96EY7 689 aaKnown RBP20.35■□□□□ 0.85
LRFN4-201ENST00000309602 MIPEPQ99797 713 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 NOP53Q9NZM5 478 aaKnown RBP20.35■□□□□ 0.85
LRFN4-201ENST00000309602 I3L4J1 428 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 I6L893 689 aaPredicted RBP20.35■□□□□ 0.85
LRFN4-201ENST00000309602 AMHP03971 560 aa20.35■□□□□ 0.85
LRFN4-201ENST00000309602 GPRIN1Q7Z2K8 1008 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms