RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 SNX19Q92543 992 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 PSMD7P51665 324 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 NEDD8Q15843 81 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 ZBTB46Q86UZ6 589 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 FAM81AQ8TBF8 368 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 PIF1Q9H611 641 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 LSM7Q9UK45 103 aaKnown RBP18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 ACOT9Q9Y305 439 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 PSMD10O75832 226 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 CKMP06732 381 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 HMOX2P30519 316 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 NDST1P52848 882 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 GSTA3Q16772 222 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 ADAM32Q8TC27 787 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 MAN1C1Q9NR34 630 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 NUDT5Q9UKK9 219 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 AP4E1Q9UPM8 1137 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 TRIM17Q9Y577 477 aa18.64■□□□□ 0.57
ATP2A2-201ENST00000308664 ZMYM2Q9UBW7 1377 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 AP3B1O00203 1094 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 WFS1O76024 890 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 ASMTLO95671 621 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 VDRP11473 427 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 S100A5P33763 92 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 GSCP56915 257 aaPredicted RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 DMC1Q14565 340 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 TBCELQ5QJ74 424 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 OTUD3Q5T2D3 398 aaPredicted RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 TSHZ1Q6ZSZ6 1077 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 MRIQ9BWK5 157 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 ACSS3Q9H6R3 686 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 COMMD3-BMI1R4GMX3 469 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 A0A096LPK6 155 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 C5orf60A6NFR6 353 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 PRR5-ARHGAP8B1AHC4 643 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 HNRNPRO43390 633 aaKnown RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 ARHGAP8P85298 464 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 TRIM60Q495X7 471 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 PCSK9Q8NBP7 692 aaKnown RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 NSMCE4AQ9NXX6 385 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 NCKIPSDQ9NZQ3 722 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 RPTORQ8N122 1335 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 APOC4-APOC2K7ER74 178 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 APOC2P02655 101 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 LGALS2P05162 132 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 ODC1P11926 461 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 GP5P40197 560 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 ASTE1Q2TB18 679 aaPredicted RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 SPDYAQ5MJ70 313 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 LATS2Q9NRM7 1088 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 PLA2G4CQ9UP65 541 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 MYRFQ9Y2G1 1151 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 LIN7AO14910 233 aaPredicted RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 MGAT1P26572 445 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 FKBP1AP62942 108 aaKnown RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 CTXN3Q4LDR2 81 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 RBM44Q6ZP01 1051 aaKnown RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 ALLCQ8N6M5 410 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 GAD1Q99259 594 aa18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 RPL26L1Q9UNX3 145 aaKnown RBP18.63■□□□□ 0.57
ATP2A2-201ENST00000308664 HEATR9A2RTY3 570 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 SUPT3HB4E1H0 165 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 GOLGA8TH3BQL2 631 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 NR5A2O00482 541 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 CYP2F1P24903 491 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 CSE1LP55060 971 aaKnown RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 CRADDP78560 199 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 SLC5A9Q2M3M2 681 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 LRRC8BQ6P9F7 803 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ZNF572Q7Z3I7 529 aaPredicted RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 SCUBE3Q8IX30 993 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 PCDH20Q8N6Y1 951 aaKnown RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ASAP3Q8TDY4 903 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 PHACTR1Q9C0D0 580 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 EXOSC4Q9NPD3 245 aaKnown RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ACKR2O00590 384 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ARHGEF9O43307 516 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 RPL5P46777 297 aaKnown RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 LPCAT4Q643R3 524 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 FOXR2Q6PJQ5 311 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ARRDC4Q8NCT1 418 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ZC4H2Q9NQZ6 224 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 CCDC167Q9P0B6 97 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 SH3BP1Q9Y3L3 701 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 KCNK1O00180 336 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 ALOX15BO15296 676 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 CLOCKO15516 846 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 MAPTP10636 758 aaKnown RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 EFEMP1Q12805 493 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 NPNTQ6UXI9 565 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.62■□□□□ 0.575e-7■■■■■ 31.3
ATP2A2-201ENST00000308664 NR1H4Q96RI1 486 aaPredicted RBP18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 CHKBQ9Y259 395 aa18.62■□□□□ 0.57
ATP2A2-201ENST00000308664 MANSC4A6NHS7 340 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms