RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ATP9BO43861 1147 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 KPNA6O60684 536 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 FAM155BO75949 473 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 MT-ND3P03897 115 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CALB1P05937 261 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 SSTR1P30872 391 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 SERPINB4P48594 390 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 SERPINB8P50452 374 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 NDST1P52848 882 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TAP1Q03518 808 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CDK18Q07002 472 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 EFTUD2Q15029 972 aaKnown RBP eCLIP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 FNBP1LQ5T0N5 605 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF618Q5T7W0 954 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 SERINC5Q86VE9 423 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 NIPA2Q8N8Q9 360 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 UBA3Q8TBC4 463 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 WDR60Q8WVS4 1066 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CPT1BQ92523 772 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 OXNAD1Q96HP4 312 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 APOPT1Q96IL0 206 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF184Q99676 751 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 MRPL45Q9BRJ2 306 aaKnown RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TRPV6Q9H1D0 765 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 EPB41L1Q9H4G0 881 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 KLHL11Q9NVR0 708 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CYTH4Q9UIA0 394 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ITGA11Q9UKX5 1188 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 STRIP2Q9ULQ0 834 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 LPXNO60711 386 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ASLP04424 464 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 HOXD10P28358 340 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CD97P48960 835 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ACLYP53396 1101 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 USP46P62068 366 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF252P-AS1Q0IIN9 211 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CBLBQ13191 982 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ITGA9Q13797 1035 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 BTG3Q14201 252 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 KYAT1Q16773 422 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 SH2D5Q6ZV89 423 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 NET1Q7Z628 596 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZC3H18Q86VM9 953 aaKnown RBP10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TMPRSS6Q8IU80 811 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CCDC110Q8TBZ0 833 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TMEM121Q9BTD3 319 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 KRT82Q9NSB4 513 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 CNTN3Q9P232 1028 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 FCHO1O14526 889 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 SPTLC1O15269 473 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 CILPO75339 1184 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 BANF1O75531 89 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ATP5BP06576 529 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 PDGFRBP09619 1106 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 TCF4P15884 667 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 PGM1P36871 562 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ZBTB6Q15916 424 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ADRM1Q16186 407 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 MSS51Q4VC12 460 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ZFYVE27Q5T4F4 411 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 NCCRP1Q6ZVX7 275 aaPredicted RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 POLNQ7Z5Q5 900 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 RNF180Q86T96 592 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 RSPH3Q86UC2 560 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 PALM2Q8IXS6 379 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 FBXO36Q8NEA4 188 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 TMEM176AQ96HP8 235 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 CYTH2Q99418 400 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 CORO1BQ9BR76 489 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 WDR83Q9BRX9 315 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 SENP6Q9GZR1 1112 aaPredicted RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ARHGEF4Q9NR80 690 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 FBXO6Q9NRD1 293 aaPredicted RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 KCNK4Q9NYG8 393 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 NME7Q9Y5B8 376 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 GOLGA8SH3BPF8 625 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 MGEA5O60502 916 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 LSM8O95777 96 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 IFNB1P01574 187 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 AXLP30530 894 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 MLH1P40692 756 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 THOC5Q13769 683 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 MAP3K21Q5TCX8 1036 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ANKRD22Q5VYY1 191 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 C9orf57Q5W0N0 161 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 SMYD5Q6GMV2 418 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ACOT1Q86TX2 421 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 BEST2Q8NFU1 509 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 GAD1Q99259 594 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
APOBEC3F-201ENST00000308521 PLEKHA5Q9HAU0 1116 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms