RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TLE2Q04725 743 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 CNTN1Q12860 1018 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 RGS9BPQ6ZS82 235 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ANO5Q75V66 913 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNF571Q7Z3V5 609 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 SYTL1Q8IYJ3 562 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 OSGEPQ9NPF4 335 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 CFAP97Q9P2B7 532 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TUBGCP4Q9UGJ1 667 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ARFGEF2Q9Y6D5 1785 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ITGB3BPQ13352 177 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 CBWD6Q4V339 395 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 HJURPQ8NCD3 748 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 EXD1Q8NHP7 514 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBL1YQ9BQ87 522 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 C11orf84Q9BUA3 381 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 SHCBP1LQ9BZQ2 653 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TM6SF2Q9BZW4 377 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 BAZ2AQ9UIF9 1905 aaKnown RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3DA0A087WVF3 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3IA0A087WXS9 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3EA0A087X179 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 A0A1B0GUA9 196 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3LB9A6J9 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TLR5O60602 858 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 CCDC22O60826 627 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3HP0C7X1 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 RFC1P35251 1148 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3CQ6IPX1 549 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 RAD9BQ6WBX8 426 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TBC1D3Q8IZP1 549 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 MMGT1Q8N4V1 131 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 C12orf29Q8N999 325 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 POLR1EQ9GZS1 481 aaKnown RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 PTCH2Q9Y6C5 1203 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ARL5CA6NH57 179 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 HAUS5O94927 633 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 GCNT1Q02742 428 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 HIC1Q14526 733 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TOMM20Q15388 145 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM183BPQ6ZVS7 135 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TTC7BQ86TV6 843 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 OR8D1Q8WZ84 308 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ING2Q9H160 280 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 EPC1Q9H2F5 836 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TMEM51Q9NW97 253 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 OR12D3Q9UGF7 316 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 CDV3Q9UKY7 258 aaKnown RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 AURKCQ9UQB9 309 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNF536O15090 1300 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 GNG14A0A1W2PPG7 69 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 STMN1P16949 149 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 MAP2K2P36507 400 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 GTF2BQ00403 316 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 PGS1Q32NB8 556 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM162AQ96A26 154 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 KLF6Q99612 283 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 FRMD8Q9BZ67 464 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 NPHS2Q9NP85 383 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 SLC45A1Q9Y2W3 748 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 SUPT7LO94864 414 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 GLRBP48167 497 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 SERPINB8P50452 374 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 CASP5P51878 434 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 RAB30Q15771 203 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 TSPAN18Q96SJ8 248 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 NDE1Q9NXR1 346 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 SHOC2Q9UQ13 582 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 HPSEQ9Y251 543 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 FKBP9O95302 570 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 CALCAP01258 141 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 HTR1BP28222 390 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 ALDH9A1P49189 494 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 FUT10Q6P4F1 479 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 FKBP9P1Q75LS8 142 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 MRPL45Q9BRJ2 306 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 AGXT2Q9BYV1 514 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 ZYG11BQ9C0D3 744 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 IL1RL2Q9HB29 575 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 PIH1D1Q9NWS0 290 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 SLC44A2Q8IWA5 706 aaPredicted RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 CNPY4Q8N129 248 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNF296Q8WUU4 475 aaPredicted RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 MCRS1Q96EZ8 462 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 NRBF2Q96F24 287 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 CYP4F12Q9HCS2 524 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 DUS2Q9NX74 493 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 SMG5Q9UPR3 1016 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 EIF3LQ9Y262 564 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 SALL3Q9BXA9 1300 aa10.96□□□□□ -0.65
SYNPO2-201ENST00000307142 FGF10O15520 208 aaPredicted RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 WASP42768 502 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 CLCNKBP51801 687 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms