RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ZCCHC23Q6ZST2 131 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 DEFB107AQ8IZN7 70 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 INPP4AQ96PE3 977 aaPredicted RBP16.75■□□□□ 0.27
BRD3-201ENST00000303407 ADGRE3Q9BY15 652 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 ZNF556Q9HAH1 456 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SYTL2Q9HCH5 934 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 TCF7L2Q9NQB0 619 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 EVPLLA8MZ36 301 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 NOL4O94818 638 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 ITGAVP06756 1048 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 AKR1A1P14550 325 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 BEX3Q00994 111 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 NFYCQ13952 458 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 FSCN1Q16658 493 aaKnown RBP16.75■□□□□ 0.27
BRD3-201ENST00000303407 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 CKAP2Q8WWK9 683 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 ULBP1Q9BZM6 244 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 KLHL4Q9C0H6 718 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SLC25A13Q9UJS0 675 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 A0A096LPK6 155 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SERPINB3P29508 390 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SERPINB10P48595 397 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 CDK16Q00536 496 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 UNC93AQ86WB7 457 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SEPT8Q92599 483 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 APBA2Q99767 749 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 IRF6O14896 467 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SCNN1BP51168 640 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 RTP1P59025 263 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 TAS2R40P59535 323 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 ZACNQ401N2 412 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 HGSNATQ68CP4 663 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SLC30A9Q6PML9 568 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 ILDR2Q71H61 639 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 CLPBQ9H078 707 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 CAAP1Q9H8G2 361 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 STARD7Q9NQZ5 370 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 SOX13Q9UN79 622 aa16.75■□□□□ 0.27
BRD3-201ENST00000303407 DDX3YO15523 660 aaKnown RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 ATP6V1B1P15313 513 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 TMPRSS6Q8IU80 811 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 MSL3Q8N5Y2 521 aaKnown RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 LPCAT1Q8NF37 534 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 SEMA4DQ92854 862 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 OTUB1Q96FW1 271 aaPredicted RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 PCDHB18PQ96TA0 734 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 ELOVL4Q9GZR5 314 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 SNX13Q9Y5W8 968 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 TPP1O14773 563 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 LYPLA2O95372 231 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 CRABP2P29373 138 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 PARP6Q2NL67 630 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 TTC33Q6PID6 262 aaPredicted RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 ADCK1Q86TW2 530 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 PHF21BQ96EK2 531 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 SERPINB11Q96P15 392 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 SH3GL3Q99963 347 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 AAASQ9NRG9 546 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 hCG_1818297A0A087WSY0 165 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 B4GALT5O43286 388 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 LCA5LO95447 670 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 ALDH2P05091 517 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 TPBGLP0DKB5 382 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 PTPN1P18031 435 aaKnown RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 BDNFP23560 247 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 RPL22P35268 128 aaKnown RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 MMRN1Q13201 1228 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 PPP1R13LQ8WUF5 828 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 PGLYRP2Q96PD5 576 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 SIKE1Q9BRV8 207 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 TMEM106CQ9BVX2 250 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 GOLGA8TH3BQL2 631 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 UBDO15205 165 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 RAMP2O60895 175 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 CBX6O95503 412 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 DAB2P98082 770 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 SLC39A12Q504Y0 691 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 IZUMO2Q6UXV1 221 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 TMEM86AQ8N2M4 240 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 USP6NLQ92738 828 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 PWWP2AQ96N64 755 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 CDK5RAP1Q96SZ6 601 aaKnown RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 TMEM161AQ9NX61 479 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 TRIM16O95361 564 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 ALBP02768 609 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 LTFP02788 710 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 GJB1P08034 283 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 RPL7AP62424 266 aaKnown RBP16.74■□□□□ 0.27
BRD3-201ENST00000303407 PRKAA1Q13131 559 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 JADE3Q92613 823 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 ARMCX1Q9P291 453 aa16.74■□□□□ 0.27
BRD3-201ENST00000303407 FKBP6O75344 327 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 ITGALP20701 1170 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 TRMT5Q32P41 509 aaKnown RBP16.73■□□□□ 0.27
BRD3-201ENST00000303407 DDI1Q8WTU0 396 aa16.73■□□□□ 0.27
BRD3-201ENST00000303407 OTULINQ96BN8 352 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms