RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TRIP4Q15650 581 aaPredicted RBP13.43□□□□□ -0.26
CCDC7-202ENST00000302316 TADA2BQ86TJ2 420 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 PRUNE1Q86TP1 453 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SNF8Q96H20 258 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 NACA2Q9H009 215 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 UXTQ9UBK9 157 aaPredicted RBP13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 C5orf67F2Z3F1 127 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 MFSD11O43934 449 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 LPXNO60711 386 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 GLUD1P00367 558 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 FAM153BP0C7A2 387 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 ETS1P14921 441 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 ERCC2P18074 760 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 EPHB2P29323 1055 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 HCAR3P49019 387 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 GDF10P55107 478 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 CALCOCO2Q13137 446 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 FAM153CQ494X1 144 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 SNX30Q5VWJ9 437 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 B4GALNT4Q76KP1 1039 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 DNAJB7Q7Z6W7 309 aaPredicted RBP13.42□□□□□ -0.26
CCDC7-202ENST00000302316 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 MRPL43Q8N983 215 aaKnown RBP13.42□□□□□ -0.26
CCDC7-202ENST00000302316 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 CAVIN3Q969G5 261 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 PCDH9Q9HC56 1237 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 DTLQ9NZJ0 730 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 FAM153AQ9UHL3 310 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 C2orf71A6NGG8 1288 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 DCLK1O15075 740 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 LRG1P02750 347 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 RB1P06400 928 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 C8AP07357 584 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 HMBSP08397 361 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 ZSCAN5DPP0CG00 497 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 SRGAP2BP0DMP2 458 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 SLC10A2Q12908 348 aaPredicted RBP13.42□□□□□ -0.26
CCDC7-202ENST00000302316 HECTD3Q5T447 861 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 COL13A1Q5TAT6 717 aaPredicted RBP13.42□□□□□ -0.26
CCDC7-202ENST00000302316 LILRA6Q6PI73 481 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 CCDC149Q6ZUS6 474 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 BZW1Q7L1Q6 419 aaKnown RBP13.42□□□□□ -0.26
CCDC7-202ENST00000302316 UNC45BQ8IWX7 931 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 CCDC33Q8N5R6 958 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 FAM71DQ8N9W8 422 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 KREMEN2Q8NCW0 462 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 FMO2Q99518 471 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 ZDHHC18Q9NUE0 388 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 WHRNQ9P202 907 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
CCDC7-202ENST00000302316 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
CCDC7-202ENST00000302316 ATP5C1P36542 298 aaKnown RBP13.41□□□□□ -0.26
CCDC7-202ENST00000302316 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
CCDC7-202ENST00000302316 PAFAH1B3Q15102 231 aaKnown RBP13.41□□□□□ -0.26
CCDC7-202ENST00000302316 RWDD4Q6NW29 188 aaKnown RBP13.41□□□□□ -0.26
CCDC7-202ENST00000302316 ZDHHC24Q6UX98 284 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 HDXQ7Z353 690 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 CDKL3Q8IVW4 592 aaPredicted RBP13.41□□□□□ -0.26
CCDC7-202ENST00000302316 ZNF276Q8N554 614 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 ATP6V0D2Q8N8Y2 350 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 FBXO25Q8TCJ0 367 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 FUT8Q9BYC5 575 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 ASB3Q9Y575 518 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 HS3ST4Q9Y661 456 aa13.41□□□□□ -0.26
CCDC7-202ENST00000302316 CFAP69A5D8W1 941 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 GRM6O15303 877 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 KCNN4O15554 427 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 ITIH2P19823 946 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 IVDP26440 423 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 PPP3CCP48454 512 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 GPS1Q13098 491 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 XRCC4Q13426 336 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 CASP8Q14790 479 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 P3H1Q32P28 736 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 BTN2A3PQ96KV6 586 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 SAMD11Q96NU1 681 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 OLFM3Q96PB7 478 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 FAM129AQ9BZQ8 928 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 ZNF334Q9HCZ1 680 aaPredicted RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 HBS1LQ9Y450 684 aaKnown RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 GBF1Q92538 1859 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 BCLAF3A2AJT9 711 aaKnown RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 COCHO43405 550 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 IGLV3-27P01718 113 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 RBL1P28749 1068 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 HTR7P34969 479 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 SERPINB6P35237 376 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 IRS1P35568 1242 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 TUBP50607 506 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 ITGA8P53708 1063 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 RING1Q06587 406 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms