RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ALDH3B2P48448 385 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PSMC1P62191 440 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CEACAM7Q14002 265 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PPP2R5DQ14738 602 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PIGGQ5H8A4 983 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 DHRS4L2Q6PKH6 230 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 TMEM126BQ8IUX1 230 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 TMEM102Q8N9M5 508 aaPredicted RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CATSPER1Q8NEC5 780 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 BHLHE22Q8NFJ8 381 aaPredicted RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 FNIP1Q8TF40 1166 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CPXM1Q96SM3 734 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CDRT15Q96T59 188 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF518BQ9C0D4 1074 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 DEFB129Q9H1M3 183 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 COG4Q9H9E3 785 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF358Q9NW07 568 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 TCEAL9Q9UHQ7 104 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ZNHIT2Q9UHR6 403 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 DOCK5Q9H7D0 1870 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 GLRA3O75311 464 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 STBD1O95210 358 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 ATG7O95352 703 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 TRUB2O95900 331 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CAPNS1P04632 268 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PSMC3P17980 439 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 TCF7P36402 384 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 HARS2P49590 506 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 SERPINB9P50453 376 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CCR3P51677 355 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 NDST2P52849 883 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CDH6P55285 790 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 ABCE1P61221 599 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 NAA20P61599 178 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PFKPQ01813 784 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 NRF1Q16656 503 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 SNX32Q86XE0 403 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CPNE9Q8IYJ1 553 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 LZTR1Q8N653 840 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF781Q8N8C0 355 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 NLRP7Q8WX94 980 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CLEC4DQ8WXI8 215 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 GFM2Q969S9 779 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PGBD4Q96DM1 585 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CAMKK2Q96RR4 588 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 EBNA1BP2Q99848 306 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 SLX1AQ9BQ83 275 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 POLR3FQ9H1D9 316 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 STYXL1Q9Y6J8 313 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 KLRG2A4D1S0 409 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 COL6A2P12110 1019 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CPA3P15088 417 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF26P17031 533 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 JAK3P52333 1124 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 CNTN2Q02246 1040 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 C16orf72Q14CZ0 275 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 ADRM1Q16186 407 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PPM1JQ5JR12 505 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 NCCRP1Q6ZVX7 275 aaPredicted RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 DSELQ8IZU8 1212 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 AGR3Q8TD06 166 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 RTP4Q96DX8 246 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 TDRD3Q9H7E2 651 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PFDN4Q9NQP4 134 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PDLIM7Q9NR12 457 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 RRN3Q9NYV6 651 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 TMEM216Q9P0N5 145 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 COPG2Q9UBF2 871 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PRPF19Q9UMS4 504 aaKnown RBP11.18□□□□□ -0.62
ZNF558-201ENST00000301475 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
ZNF558-201ENST00000301475 KANSL1LA0AUZ9 987 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 TMX2-CTNND1H3BSU7 103 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 STX16-NPEPL1H3BU86 382 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 RNASEH2AO75792 299 aaKnown RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 AMHP03971 560 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ERBB2P04626 1255 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 RALBP11234 206 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 MYCLP12524 364 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PORP16435 677 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PIK3R1P27986 724 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 MAGEA6P43360 314 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 MYL6P60660 151 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 CTBSQ01459 385 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GSTM4Q03013 218 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 STXBP5Q5T5C0 1151 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 EPGNQ6UW88 154 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PACS1Q6VY07 963 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 BNC2Q6ZN30 1099 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 XYLT1Q86Y38 959 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms