RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 MACC1Q6ZN28 852 aa11.56□□□□□ -0.56
GCN1-201ENST00000300648 PROX1Q92786 737 aa11.56□□□□□ -0.56
GCN1-201ENST00000300648 LENG1Q96BZ8 264 aaPredicted RBP11.56□□□□□ -0.56
GCN1-201ENST00000300648 PPP2R3BQ9Y5P8 575 aa11.56□□□□□ -0.56
GCN1-201ENST00000300648 TADA2AO75478 443 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TCF4P15884 667 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 GTF2E2P29084 291 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 FAUP35544 74 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 SNAPC2Q13487 334 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 POTEHQ6S545 545 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 MARK2Q7KZI7 788 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 TMC3Q7Z5M5 1100 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 PTCD3Q96EY7 689 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 QRFPRQ96P65 431 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 WDCPQ9H6R7 721 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 USP18Q9UMW8 372 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 DNAJC16Q9Y2G8 782 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 KPNA6O60684 536 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CYP2A7P20853 494 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CDH17Q12864 832 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CDH18Q13634 790 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TUBA3CQ13748 450 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 BHLHB9Q6PI77 547 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 PDPRQ8NCN5 879 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 OR56A4Q8NGH8 313 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 FAM81AQ8TBF8 368 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CHORDC1Q9UHD1 332 aaPredicted RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 LAYNQ6UX15 382 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TSHZ1Q6ZSZ6 1077 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 NANOGNBQ7Z5D8 188 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 MNTQ99583 582 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 RNPEPQ9H4A4 650 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CDH9Q9ULB4 789 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 BTN3A3O00478 584 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 GYS1P13807 737 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 YWHAQP27348 245 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 ATP12AP54707 1039 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CDC42P60953 191 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TRIM48Q8IWZ4 208 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 REEP1Q9H902 201 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 MTMR4Q9NYA4 1195 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 MYMKA6NI61 221 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 IDH3BO43837 385 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 GSTT1P30711 240 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 FEN1P39748 380 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 PCSK7Q16549 785 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TDRD10Q5VZ19 366 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 GLB1LQ6UWU2 654 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 CCDC185Q8N715 623 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 EFHD2Q96C19 240 aaPredicted RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 S100A13Q99584 98 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 NOL6Q9H6R4 1146 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 RAPGEFL1Q9UHV5 662 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 HBP1O60381 514 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 TPST1O60507 370 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 KLHL18O94889 574 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 ATP6V1C1P21283 382 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 NMT1P30419 496 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 PUDPQ08623 228 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 FASTKQ14296 549 aaKnown RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 PCBP1Q15365 356 aaKnown RBP eCLIP11.55□□□□□ -0.56
GCN1-201ENST00000300648 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 ZNF624Q9P2J8 865 aaPredicted RBP11.55□□□□□ -0.56
GCN1-201ENST00000300648 V9GYQ6 96 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
GCN1-201ENST00000300648 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 TPD52L2O43399 206 aaKnown RBP11.54□□□□□ -0.56
GCN1-201ENST00000300648 RAD17O75943 681 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 PGM3O95394 542 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 RAG1P15918 1043 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 ALOX12P18054 663 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 GP5P40197 560 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 ALDH1A3P47895 512 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 NEK3P51956 506 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
GCN1-201ENST00000300648 STK4Q13043 487 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 ZNF846Q147U1 533 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 FAM180AQ6UWF9 173 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 LZTR1Q8N653 840 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
GCN1-201ENST00000300648 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 EMC3Q9P0I2 261 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 DOLKQ9UPQ8 538 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 PLA2G6O60733 806 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 MED24O75448 989 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 SKAP2O75563 359 aaPredicted RBP11.54□□□□□ -0.56
GCN1-201ENST00000300648 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 QPRTQ15274 297 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 AGKQ53H12 422 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 PRR23BQ6ZRT6 265 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 HEATR4Q86WZ0 1026 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 REXO1L1PQ8IX06 675 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 MTMR12Q9C0I1 747 aa11.54□□□□□ -0.56
GCN1-201ENST00000300648 PADI4Q9UM07 663 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms