RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CGRRF1Q99675 332 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 EBNA1BP2Q99848 306 aaKnown RBP13.39□□□□□ -0.27
TVP23A-201ENST00000299866 PCDH18Q9HCL0 1135 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 TMX2Q9Y320 296 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 STAMBPO95630 424 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 MYL4P12829 197 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
TVP23A-201ENST00000299866 CD97P48960 835 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 JAK3P52333 1124 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
TVP23A-201ENST00000299866 BORAQ6PGQ7 559 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 ANKRD23Q86SG2 305 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 KYQ8NBH2 561 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 KBTBD7Q8WVZ9 684 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 APBB2Q92870 758 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 RCN3Q96D15 328 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 ATXN7L3BQ96GX2 97 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 SIGLEC10Q96LC7 697 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 CPXM1Q96SM3 734 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 PLGRKTQ9HBL7 147 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 INIPQ9NRY2 104 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 EPS15L1Q9UBC2 864 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 NXF1Q9UBU9 619 aaKnown RBP13.39□□□□□ -0.27
TVP23A-201ENST00000299866 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
TVP23A-201ENST00000299866 FAM189A1O60320 539 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 EIF4BP23588 611 aaKnown RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 RPL10P27635 214 aaKnown RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 PIK3R1P27986 724 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 MLH1P40692 756 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 CDK9P50750 372 aaKnown RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 SDCBP2Q9H190 292 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 ARHGEF37A1IGU5 675 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 METTL18O95568 372 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 HMGCRP04035 888 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 P4HA1P13674 534 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 HSD17B4P51659 736 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 CEACAM7Q14002 265 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 ADRM1Q16186 407 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 GRAMD4Q6IC98 578 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 KRT80Q6KB66 452 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 Q6ZNX1 250 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 NCCRP1Q6ZVX7 275 aaPredicted RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 ZBTB33Q86T24 672 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 TICAM1Q8IUC6 712 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 ARHGAP28Q9P2N2 729 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 BARX2Q9UMQ3 279 aaPredicted RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 NR2E3Q9Y5X4 410 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 SH3PXD2BA1X283 911 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 K7ERI5 159 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 GRAP2O75791 330 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 RNASEH2AO75792 299 aaKnown RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 ERBB2P04626 1255 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 GRK2P25098 689 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 TYK2P29597 1187 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 BCAR1P56945 870 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 C16orf89Q6UX73 402 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 PACS1Q6VY07 963 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 CLVS1Q8IUQ0 354 aaPredicted RBP13.38□□□□□ -0.27
TVP23A-201ENST00000299866 MARK4Q96L34 752 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 KLHL32Q96NJ5 620 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 NUF2Q9BZD4 464 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 ZNF518BQ9C0D4 1074 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 FAM96AQ9H5X1 160 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 COPG2Q9UBF2 871 aa13.38□□□□□ -0.27
TVP23A-201ENST00000299866 C7orf72A4D263 438 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 OATP04181 439 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 ZNF23P17027 643 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 TNFSF9P41273 254 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 NDST2P52849 883 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 ZNF423Q2M1K9 1284 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 C15orf59Q2T9L4 293 aaPredicted RBP13.37□□□□□ -0.27
TVP23A-201ENST00000299866 CPNE9Q8IYJ1 553 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 MYO1HQ8N1T3 1032 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
TVP23A-201ENST00000299866 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 SLC4A5Q9BY07 1137 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
TVP23A-201ENST00000299866 OSBPL6Q9BZF3 934 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 COQ10BQ9H8M1 238 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 TCF7L2Q9NQB0 619 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 PCDHA11Q9Y5I1 949 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 PCDHA10Q9Y5I2 948 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 PSAT1Q9Y617 370 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
TVP23A-201ENST00000299866 CPA3P15088 417 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms