RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 L1RE1Q9UN81 338 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 SPAARA0A1B0GVQ0 90 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 GABRDO14764 452 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 TCF3P15923 654 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 GNL1P36915 607 aaPredicted RBP21.97■■□□□ 1.11
SMCO4-201ENST00000298966 P2RY2P41231 377 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 NOMO3P69849 1222 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 ZNF394Q53GI3 561 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 TMEFF1Q8IYR6 380 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 ACBD6Q9BR61 282 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 MRPL45Q9BRJ2 306 aaKnown RBP21.97■■□□□ 1.11
SMCO4-201ENST00000298966 IRX2Q9BZI1 471 aaPredicted RBP21.97■■□□□ 1.11
SMCO4-201ENST00000298966 MIS12Q9H081 205 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 ACP6Q9NPH0 428 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 TFR2Q9UP52 801 aa21.97■■□□□ 1.11
SMCO4-201ENST00000298966 A8MXQ7 604 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 H0Y626 953 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 TRIM16O95361 564 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 SETSIPP0DME0 302 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 HDCP19113 662 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 BRD2P25440 801 aaKnown RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 ATXN3P54252 364 aaPredicted RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 C1QBPQ07021 282 aaKnown RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 INTS6LQ5JSJ4 861 aaKnown RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 ARHGAP17Q68EM7 881 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 LCLAT1Q6UWP7 414 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 SLC35F6Q8N357 371 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 PDCL2Q8N4E4 241 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 HDDC3Q8N4P3 179 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 KBTBD7Q8WVZ9 684 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 RLN3Q8WXF3 142 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 HEXIM2Q96MH2 286 aaKnown RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 POLMQ9NP87 494 aaPredicted RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 DDX43Q9NXZ2 648 aaKnown RBP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 BCCIPQ9P287 314 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 UVRAGQ9P2Y5 699 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 ARHGAP26Q9UNA1 814 aa21.96■■□□□ 1.11
SMCO4-201ENST00000298966 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMCO4-201ENST00000298966 NBEAQ8NFP9 2946 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 UPK3BL1B0FP48 263 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 UPK3BL2E5RIL1 263 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 FANCGO15287 622 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 MTA2O94776 668 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 CALB1P05937 261 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 PCSK1P29120 753 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 PTGER3P43115 390 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 TERF1P54274 439 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 SNX16P57768 344 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 SEMA3BQ13214 749 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 TUBB2AQ13885 445 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 BYSLQ13895 437 aaKnown RBP21.95■■□□□ 1.1
SMCO4-201ENST00000298966 LYSMD4Q5XG99 296 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 SLC23A3Q6PIS1 610 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 TMEM92Q6UXU6 159 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 PIP4P1Q86T03 277 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 SCN4BQ8IWT1 228 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 SYCE1Q8N0S2 351 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 TWNKQ96RR1 684 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 TUBB2BQ9BVA1 445 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 PACSIN1Q9BY11 444 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 TMEM74BQ9NUR3 256 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 LCMT1Q9UIC8 334 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 STRIP2Q9ULQ0 834 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 PLXND1Q9Y4D7 1925 aa21.95■■□□□ 1.1
SMCO4-201ENST00000298966 ITPR1Q14643 2758 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 MACROD2A1Z1Q3 448 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 CTAGE9A4FU28 777 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 C2orf78A6NCI8 922 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 ANTXRLA6NF34 631 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 TAF4O00268 1085 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 O00370 1275 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 CFIP05156 583 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 ACAT1P24752 427 aaKnown RBP21.94■■□□□ 1.1
SMCO4-201ENST00000298966 HSF5Q4G112 596 aaPredicted RBP21.94■■□□□ 1.1
SMCO4-201ENST00000298966 SPDYCQ5MJ68 293 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 SPATA2LQ8IUW3 424 aaPredicted RBP21.94■■□□□ 1.1
SMCO4-201ENST00000298966 ALLCQ8N6M5 410 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 TFAP2BQ92481 460 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 CYFIP2Q96F07 1278 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 NAPGQ99747 312 aaPredicted RBP21.94■■□□□ 1.1
SMCO4-201ENST00000298966 L2HGDHQ9H9P8 463 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 TAS2R14Q9NYV8 317 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 HESX1Q9UBX0 185 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 HMGXB4Q9UGU5 601 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 DUSP10Q9Y6W6 482 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 ADAMTS9Q9P2N4 1935 aa21.94■■□□□ 1.1
SMCO4-201ENST00000298966 TMCO5BA8MYB1 307 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 KLF8O95600 359 aaPredicted RBP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 CYP1A2P05177 515 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 HNRNPLP14866 589 aaKnown RBP eCLIP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 NAP1L1P55209 391 aaKnown RBP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 ADAMTS20P59510 1910 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 CFAP221Q4G0U5 840 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 EOGTQ5NDL2 527 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 NAA35Q5VZE5 725 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 MCOLN2Q8IZK6 566 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 TXNDC5Q8NBS9 432 aaKnown RBP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 CEP192Q8TEP8 1941 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 ZNF653Q96CK0 615 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms