RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ROGDIQ9GZN7 287 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 RSL24D1Q9UHA3 163 aaKnown RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 TRHDEQ9UKU6 1024 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 COX4I1P13073 169 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 EIF4BP23588 611 aaKnown RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 YY1P25490 414 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 NR6A1Q15406 480 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 CBWD6Q4V339 395 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 CBWD3Q5JTY5 395 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 CBWD5Q5RIA9 395 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 KRT73Q86Y46 540 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 MTMR9Q96QG7 549 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 FANCEQ9HB96 536 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 NCF1BA6NI72 391 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 NCF1CA8MVU1 366 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 EPHB6O15197 1021 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 PDE9AO76083 593 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 NCF1P14598 390 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 PIK3R1P27986 724 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 RXRGP48443 463 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 NRF1Q16656 503 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 PDZK1Q5T2W1 519 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 TRIQKQ629K1 86 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 RBM44Q6ZP01 1051 aaKnown RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 RINLQ6ZS11 566 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 CCDC80Q76M96 950 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 C8orf59Q8N0T1 100 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-201ENST00000296302 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 FIG4Q92562 907 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 NDNQ99608 321 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 ANAPC2Q9UJX6 822 aa11.28□□□□□ -0.6
PBRM1-201ENST00000296302 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 PIGNO95427 931 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 CRTAMO95727 393 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 SLC25A27O95847 323 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 MT-CO1P00395 513 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.6
PBRM1-201ENST00000296302 ALOX12P18054 663 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 BST1Q10588 318 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 BST2Q10589 180 aaKnown RBP11.27□□□□□ -0.6
PBRM1-201ENST00000296302 BFSP2Q13515 415 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 TTC23Q5W5X9 447 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 ZSWIM2Q8NEG5 633 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 ACMSDQ8TDX5 336 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 KATNAL1Q9BW62 490 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 PHACTR1Q9C0D0 580 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 PNPLA3Q9NST1 481 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 CCDC167Q9P0B6 97 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 CCDC154A6NI56 674 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 BIRC5O15392 142 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 LIASO43766 372 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 HS6ST1O60243 411 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 SERPIND1P05546 499 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 WASHC5Q12768 1159 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 AADACL2Q6P093 401 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 ALLCQ8N6M5 410 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 LNX1Q8TBB1 728 aaPredicted RBP11.27□□□□□ -0.6
PBRM1-201ENST00000296302 SPATA16Q9BXB7 569 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 DPY30Q9C005 99 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 DMTF1Q9Y222 760 aa11.27□□□□□ -0.6
PBRM1-201ENST00000296302 CD3EAPO15446 510 aaKnown RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 ADCY6O43306 1168 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 SLITRK3O94933 977 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 HOXB8P17481 243 aaPredicted RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 POU1F1P28069 291 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 RARRES1P49788 294 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 BROXQ5VW32 411 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 MFSD5Q6N075 450 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 PHF21BQ96EK2 531 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 OSBPL11Q9BXB4 747 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM114B3SHH9 223 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 PSMD12O00232 456 aaPredicted RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 KCNQ2O43526 872 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 PLA2G6O60733 806 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 TSC22D2O75157 780 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 PAEPP09466 180 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 LRPAP1P30533 357 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 HARS2P49590 506 aaKnown RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 SLC5A9Q2M3M2 681 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 TRIM71Q2Q1W2 868 aaKnown RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 ABRAXAS1Q6UWZ7 409 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 ADCK2Q7Z695 626 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 ACSS3Q9H6R3 686 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 AGO4Q9HCK5 861 aaKnown RBP11.27□□□□□ -0.61
PBRM1-201ENST00000296302 IL17RBQ9NRM6 502 aa11.27□□□□□ -0.61
PBRM1-201ENST00000296302 RGSL1A5PLK6 1076 aa11.26□□□□□ -0.61
PBRM1-201ENST00000296302 CENPXA8MT69 81 aa11.26□□□□□ -0.61
PBRM1-201ENST00000296302 TRIM38O00635 465 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms