RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 WBP2Q969T9 261 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 ASB2Q96Q27 587 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 SMG9Q9H0W8 520 aaKnown RBP18.43■□□□□ 0.54
CCDC78-201ENST00000293889 POMKQ9H5K3 350 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCDC78-201ENST00000293889 DDX56Q9NY93 547 aaKnown RBP18.43■□□□□ 0.54
CCDC78-201ENST00000293889 AP4E1Q9UPM8 1137 aa18.43■□□□□ 0.54
CCDC78-201ENST00000293889 STC2O76061 302 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 SEC31AO94979 1220 aaKnown RBP18.42■□□□□ 0.54
CCDC78-201ENST00000293889 MOCS2O96007 188 aaPredicted RBP18.42■□□□□ 0.54
CCDC78-201ENST00000293889 APOEP02649 317 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 KRT1P04264 644 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 IRF1P10914 325 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 AIF1P55008 147 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 SCAPQ12770 1279 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 SMAD2Q15796 467 aaKnown RBP18.42■□□□□ 0.54
CCDC78-201ENST00000293889 AAK1Q2M2I8 961 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 ARL13BQ3SXY8 428 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC78-201ENST00000293889 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 RAPGEF5Q92565 580 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 PLD4Q96BZ4 506 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 OSBPL9Q96SU4 736 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 XPO7Q9UIA9 1087 aaKnown RBP18.42■□□□□ 0.54
CCDC78-201ENST00000293889 ZMYM5Q9UJ78 669 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 DOCK8Q8NF50 2099 aa18.42■□□□□ 0.54
CCDC78-201ENST00000293889 PI4K2BG5E9Z4 385 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 SRGAP2O75044 1071 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 PAGE1O75459 146 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 PYGMP11217 842 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 AVPR1AP37288 418 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 MTHFRP42898 656 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 ZNF211Q13398 564 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 LONRF2Q1L5Z9 754 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 EFHC2Q5JST6 749 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 ZNF771Q7L3S4 317 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 GET4Q7L5D6 327 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 PSTKQ8IV42 348 aaKnown RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 NPAS3Q8IXF0 933 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 PYROXD2Q8N2H3 581 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 KCTD6Q8NC69 237 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 EXD1Q8NHP7 514 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 RIPOR3Q96MK2 946 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 EPC1Q9H2F5 836 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 DHX35Q9H5Z1 703 aaKnown RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 ARHGAP26Q9UNA1 814 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 VCANP13611 3396 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 LRRD1A4D1F6 860 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 CTAGE15A4D2H0 777 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 KLKB1P03952 638 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 CD48P09326 243 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 CTAGE8P0CG41 777 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 BMP1P13497 986 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 PRLRP16471 622 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 L1CAMP32004 1257 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 ARSEP51690 589 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 PUS10Q3MIT2 529 aaKnown RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 BEND6Q5SZJ8 279 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 NUGGCQ68CJ6 796 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 AADACL2Q6P093 401 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 WDR93Q6P2C0 686 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 CTAGE6Q86UF2 777 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 UNC45BQ8IWX7 931 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 CTAGE4Q8IX94 777 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 RCOR2Q8IZ40 523 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 COG1Q8WTW3 980 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 FGF13Q92913 245 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 USP13Q92995 863 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 RNF25Q96BH1 459 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 RPGRIP1Q96KN7 1286 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 HAPLN3Q96S86 360 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 KCTD15Q96SI1 283 aaPredicted RBP18.41■□□□□ 0.54
CCDC78-201ENST00000293889 CCL26Q9Y258 94 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 SNX10Q9Y5X0 201 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 SAR1BQ9Y6B6 198 aa18.41■□□□□ 0.54
CCDC78-201ENST00000293889 C3orf70A6NLC5 250 aaPredicted RBP18.4■□□□□ 0.54
CCDC78-201ENST00000293889 ERLIN1O75477 346 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 PRAMEF12O95522 483 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 KDELR1P24390 212 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 CORO1AP31146 461 aaKnown RBP18.4■□□□□ 0.54
CCDC78-201ENST00000293889 HARS2P49590 506 aaKnown RBP18.4■□□□□ 0.54
CCDC78-201ENST00000293889 CDH6P55285 790 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 DPYSL2Q16555 572 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 ODF2Q5BJF6 829 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 ANKS1BQ7Z6G8 1248 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 ATP6V0D2Q8N8Y2 350 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 ZSCAN18Q8TBC5 510 aaPredicted RBP18.4■□□□□ 0.54
CCDC78-201ENST00000293889 FAM71BQ8TC56 605 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 BTN2A3PQ96KV6 586 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 NECTIN4Q96NY8 510 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 SIK2Q9H0K1 926 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 CARD9Q9H257 536 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 PCDH18Q9HCL0 1135 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 TDP1Q9NUW8 608 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 CFAP97Q9P2B7 532 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 SLC12A6Q9UHW9 1150 aa18.4■□□□□ 0.54
CCDC78-201ENST00000293889 FAM72CH0Y354 149 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 LEFTY2O00292 366 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 ZNF185O15231 689 aa18.39■□□□□ 0.53
CCDC78-201ENST00000293889 GREM1O60565 184 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms