RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 LGALS2P05162 132 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 UBA1P22314 1058 aaKnown RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 AMPD1P23109 780 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 PHF13Q86YI8 300 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 RNASEH1O60930 286 aaKnown RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 KRT6AP02538 564 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 KRT6BP04259 564 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CYP1A1P04798 512 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 MGAT1P26572 445 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 YWHAQP27348 245 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 SKIV2L2P42285 1042 aaKnown RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 KRT6CP48668 564 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 TUBP50607 506 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 GALNTL6Q49A17 601 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ZCWPW2Q504Y3 356 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 PGBD3Q8N328 593 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 OXNAD1Q96HP4 312 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 LRRC19Q9H756 370 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CYP4F12Q9HCS2 524 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CYP39A1Q9NYL5 469 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 SNCAIPQ9Y6H5 919 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 LYPLA2O95372 231 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 BTKQ06187 659 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CYP51A1Q16850 503 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ATP6V1G2O95670 118 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 GLRA2P23416 452 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 NAA20P61599 178 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CRYMQ14894 314 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 SLC45A4Q5BKX6 768 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 BAP1Q92560 729 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ZBTB45Q96K62 511 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 NRCAMQ92823 1304 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 TMEM114B3SHH9 223 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 SERPINB3P29508 390 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 RRM2P31350 389 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ZNF143P52747 638 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 FUT11Q495W5 492 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 GPR141Q7Z602 305 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 IMPAD1Q9NX62 359 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 LNPEPQ9UIQ6 1025 aa13.09□□□□□ -0.31
PTCD1-201ENST00000292478 ZSCAN5CA6NGD5 496 aaPredicted RBP13.08□□□□□ -0.31
PTCD1-201ENST00000292478 E9PBE3 544 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 KLHL41O60662 606 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 LTFP02788 710 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 ZNF23P17027 643 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 ZNF7P17097 686 aaPredicted RBP13.08□□□□□ -0.31
PTCD1-201ENST00000292478 CNTN2Q02246 1040 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 TBL3Q12788 808 aaKnown RBP13.08□□□□□ -0.31
PTCD1-201ENST00000292478 MMRN1Q13201 1228 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 PTAR1Q7Z6K3 402 aaPredicted RBP13.08□□□□□ -0.31
PTCD1-201ENST00000292478 CCDC33Q8N5R6 958 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.31
PTCD1-201ENST00000292478 SHC3Q92529 594 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.31
PTCD1-201ENST00000292478 TAS2R13Q9NYV9 303 aa13.08□□□□□ -0.31
PTCD1-201ENST00000292478 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 A0A096LPK6 155 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 E5RJQ4 531 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 RAD51BO15315 384 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.329e-6■■■□□ 18.1
PTCD1-201ENST00000292478 AKAP5P24588 427 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 POLNQ7Z5Q5 900 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 SCUBE3Q8IX30 993 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ZNF557Q8N988 423 aaPredicted RBP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 WNT8BQ93098 351 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ZMAT2Q96NC0 199 aaKnown RBP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 IPPQ9Y573 584 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 CBX4O00257 560 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 NR5A2O00482 541 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 XPO1O14980 1071 aaKnown RBP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 HNRNPCP07910 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 SSTR1P30872 391 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 CCNG1P51959 295 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms