RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 TRPV6Q9H1D0 765 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 NUP205Q92621 2012 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 MT-ND3P03897 115 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 OR4Q2P0C623 313 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 MAGEA3P43357 314 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 TUSC3Q13454 348 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 SEMA5AQ13591 1074 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 TRIM71Q2Q1W2 868 aaKnown RBP19.88■□□□□ 0.77
BRAF-201ENST00000288602 FAM171BQ6P995 826 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 BANPQ8N9N5 519 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 MCUQ8NE86 351 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 PGLYRP2Q96PD5 576 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 ACBD6Q9BR61 282 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 KDM4CQ9H3R0 1056 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 FBXW11Q9UKB1 542 aa19.88■□□□□ 0.77
BRAF-201ENST00000288602 DCLK1O15075 740 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 PYGBP11216 843 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 PSMB4P28070 264 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 SP3Q02447 781 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 PRKD1Q15139 912 aaPredicted RBP19.87■□□□□ 0.77
BRAF-201ENST00000288602 MTFR1Q15390 333 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 OVOS1Q6IE37 1185 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 RTN4RL1Q86UN2 441 aaPredicted RBP19.87■□□□□ 0.77
BRAF-201ENST00000288602 ECHDC2Q86YB7 292 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 ZNF280BQ86YH2 543 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 CCDC63Q8NA47 563 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 RMDN2Q96LZ7 410 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 COLEC11Q9BWP8 271 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 TKTL2Q9H0I9 626 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 CSNK1G1Q9HCP0 422 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 PHTF1Q9UMS5 762 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 IQANK1A0A1B0GTG1 560 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 SUN1O94901 812 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 TPSB2P20231 275 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 ACLYP53396 1101 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 TPI1P60174 286 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 WASHC5Q12768 1159 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 GRIK3Q13003 919 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 BMPR2Q13873 1038 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 TPSAB1Q15661 275 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 CASC4Q6P4E1 433 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 ZNF567Q8N184 647 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 NPWQ8N729 165 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 WDCPQ9H6R7 721 aa19.87■□□□□ 0.77
BRAF-201ENST00000288602 WDR27A2RRH5 827 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 HACD1B0YJ81 288 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 APOEP02649 317 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 PGFP49763 221 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 SLC18A1P54219 525 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 SESN2P58004 480 aaPredicted RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 MGAT5Q09328 741 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 SEPT7Q16181 437 aaKnown RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 PDK4Q16654 411 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 BZW1Q7L1Q6 419 aaKnown RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 LRRC6Q86X45 466 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 PCSK9Q8NBP7 692 aaKnown RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 PGBD4Q96DM1 585 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 EBNA1BP2Q99848 306 aaKnown RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 FRMD8Q9BZ67 464 aaPredicted RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 TRIM49D1C9J1S8 452 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 SPAG6O75602 509 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 CSH1P0DML2 217 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 CSH2P0DML3 217 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 PAFAH1B3Q15102 231 aaKnown RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 PDK1Q15118 436 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 LACTB2Q53H82 288 aaPredicted RBP19.86■□□□□ 0.77
BRAF-201ENST00000288602 SLC26A11Q86WA9 606 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 LRRC8CQ8TDW0 803 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 PNPLA8Q9NP80 782 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 SLC17A6Q9P2U8 582 aa19.86■□□□□ 0.77
BRAF-201ENST00000288602 C9IYK1 514 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 LPXNO60711 386 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 ZWINTO95229 277 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 CKBP12277 381 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 MBTPS1Q14703 1052 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 C4orf22Q6V702 233 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 PID1Q7Z2X4 250 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 TAC4Q86UU9 113 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 RNF34Q969K3 372 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 AGAP3Q96P47 875 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 PKMYT1Q99640 499 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 OR12D3Q9UGF7 316 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 PRKAG3Q9UGI9 489 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 NUDT5Q9UKK9 219 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 M0QZQ0 153 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 TOMM70O94826 608 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 DDHD2O94830 711 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 UBOX5O94941 541 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 CYP11A1P05108 521 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 CST5P28325 142 aaPredicted RBP19.85■□□□□ 0.77
BRAF-201ENST00000288602 GLUD2P49448 558 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 SEMA3BQ13214 749 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 TTC31Q49AM3 519 aaPredicted RBP19.85■□□□□ 0.77
BRAF-201ENST00000288602 RNF180Q86T96 592 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 SLC9A7Q96T83 725 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 IL1RAPL1Q9NZN1 696 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 ARL2BPQ9Y2Y0 163 aa19.85■□□□□ 0.77
BRAF-201ENST00000288602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 PPP1R12AO14974 1030 aaPredicted RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 ALDH1A1P00352 501 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms