RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 P4HA2O15460 535 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 IRAK2O43187 625 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 SART1O43290 800 aaKnown RBP14.62□□□□□ -0.07
TPM1-202ENST00000288398 TBL1XO60907 577 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 LTFP02788 710 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 DNTTP04053 509 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 PABPC1P11940 636 aaKnown RBP14.62□□□□□ -0.07
TPM1-202ENST00000288398 TBX4P57082 545 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 CNGA2Q16280 664 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
TPM1-202ENST00000288398 NAXDQ8IW45 347 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 SCML4Q8N228 414 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 RBBP8NLQ8NC74 664 aaPredicted RBP14.62□□□□□ -0.07
TPM1-202ENST00000288398 CYB5D2Q8WUJ1 264 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 TRIM62Q9BVG3 475 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 IRX2Q9BZI1 471 aaPredicted RBP14.62□□□□□ -0.07
TPM1-202ENST00000288398 MIS12Q9H081 205 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 PCED1AQ9H1Q7 454 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 ST7Q9NRC1 585 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 ZMIZ1Q9ULJ6 1067 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 CLEC4EQ9ULY5 219 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.62□□□□□ -0.07
TPM1-202ENST00000288398 USP24Q9UPU5 2620 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 CEP192Q8TEP8 1941 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 METTL12A8MUP2 240 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 GNA14O95837 355 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 TOP3BO95985 862 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 KRT5P13647 590 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 HLA-EP13747 358 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 BRD2P25440 801 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 HLA-FP30511 346 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 MATKP42679 507 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 SFSWAPQ12872 951 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 TEAD4Q15561 434 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 TRIP6Q15654 476 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 MBLAC2Q68D91 279 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 MSANTD2Q6P1R3 559 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 BHLHA9Q7RTU4 235 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 MFN1Q8IWA4 741 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 HJURPQ8NCD3 748 aaPredicted RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 ENGASEQ8NFI3 743 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 SPATA20Q8TB22 786 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 GANCQ8TET4 914 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 SETD7Q8WTS6 366 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 ZCCHC14Q8WYQ9 949 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 DNASE2BQ8WZ79 361 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 FAM149B1Q96BN6 582 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 P2RY11Q96G91 374 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 HSFY1Q96LI6 401 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 SERPINB11Q96P15 392 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 STIM2Q9P246 746 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 SUN2Q9UH99 717 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 EIF2B4Q9UI10 523 aaKnown RBP14.61□□□□□ -0.07
TPM1-202ENST00000288398 STOML2Q9UJZ1 356 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 NCKAP1Q9Y2A7 1128 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 CEP83Q9Y592 693 aa14.61□□□□□ -0.07
TPM1-202ENST00000288398 PI4KAP42356 2102 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 KCNJ18B7U540 433 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 CAPN9O14815 690 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 PMM2O15305 246 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 MED7O43513 233 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 SH3BP5O60239 455 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 ACSL4O60488 711 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 RNASEH1O60930 286 aaKnown RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 MOCS3O95396 460 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 FGFR1OPO95684 399 aaKnown RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 IGLV3-19P01714 112 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 DLDP09622 509 aaKnown RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 CD59P13987 128 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 COPAP53621 1224 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 ZBTB16Q05516 673 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 RING1Q06587 406 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 CAMK2GQ13555 558 aaPredicted RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 CDH18Q13634 790 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 MPP7Q5T2T1 576 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 TMEM215Q68D42 235 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 PMF1Q6P1K2 205 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 RFWD3Q6PCD5 774 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 RRAGAQ7L523 313 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 UBR7Q8N806 425 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 KDF1Q8NAX2 398 aaPredicted RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 SLC35F5Q8WV83 523 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 TFAP2BQ92481 460 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 BTBD1Q9H0C5 482 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 GAREM1Q9H706 876 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 MAN1B1Q9UKM7 699 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 CTNND2Q9UQB3 1225 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 APOBEC2Q9Y235 224 aaKnown RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 MSRB2Q9Y3D2 182 aa14.6□□□□□ -0.07
TPM1-202ENST00000288398 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM1-202ENST00000288398 ASCC3Q8N3C0 2202 aaKnown RBP14.6□□□□□ -0.07
TPM1-202ENST00000288398 APOEP02649 317 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 AFPP02771 609 aaKnown RBP14.59□□□□□ -0.07
TPM1-202ENST00000288398 ACADSBP45954 432 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 AFF3P51826 1226 aaKnown RBP14.59□□□□□ -0.07
TPM1-202ENST00000288398 GCNT1Q02742 428 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 SUZ12Q15022 739 aaKnown RBP14.59□□□□□ -0.07
TPM1-202ENST00000288398 PKDCCQ504Y2 493 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 RNF219Q5W0B1 726 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms