RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 PDE1CQ14123 709 aaPredicted RBP16.4■□□□□ 0.22
MRPL49-201ENST00000279242 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 DHDDSQ86SQ9 333 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 TTC30AQ86WT1 665 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 SREK1Q8WXA9 508 aaKnown RBP16.4■□□□□ 0.22
MRPL49-201ENST00000279242 FGD4Q96M96 766 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 EBF4Q9BQW3 602 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 DHX35Q9H5Z1 703 aaKnown RBP16.4■□□□□ 0.22
MRPL49-201ENST00000279242 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 PLXNA1Q9UIW2 1896 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 IRF6O14896 467 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 SIN3BO75182 1162 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 H2AFYO75367 372 aaKnown RBP16.4■□□□□ 0.22
MRPL49-201ENST00000279242 PROCP04070 461 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 ARL4AP40617 200 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 RGS7P49802 495 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 CLCN2P51788 898 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 UBAP2LQ14157 1087 aaKnown RBP16.4■□□□□ 0.22
MRPL49-201ENST00000279242 PCLAFQ15004 111 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 GRTP1Q5TC63 336 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 SCUBE3Q8IX30 993 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 LRRC52Q8N7C0 313 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 TRAPPC12Q8WVT3 735 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 STON2Q8WXE9 905 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 CPNE1Q99829 537 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 ZNF395Q9H8N7 513 aaPredicted RBP16.4■□□□□ 0.22
MRPL49-201ENST00000279242 MTMR10Q9NXD2 777 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 DTLQ9NZJ0 730 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 CDY1Q9Y6F8 540 aa16.4■□□□□ 0.22
MRPL49-201ENST00000279242 CITO14578 2027 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 TPP1O14773 563 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 BUD23O43709 281 aaKnown RBP16.39■□□□□ 0.21
MRPL49-201ENST00000279242 PEX1O43933 1283 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 POLBP06746 335 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 GJB1P08034 283 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 ITGA2BP08514 1039 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
MRPL49-201ENST00000279242 ARF4P18085 180 aaPredicted RBP16.39■□□□□ 0.21
MRPL49-201ENST00000279242 GRM5P41594 1212 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 GLUD2P49448 558 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 HK2P52789 917 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 ASPHQ12797 758 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 CDC16Q13042 620 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 SPANXN3Q5MJ09 141 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 TREML2Q5T2D2 321 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 RNF220Q5VTB9 566 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 MTHFD1LQ6UB35 978 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 EEPD1Q7L9B9 569 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 TXNDC16Q9P2K2 825 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 COPG2Q9UBF2 871 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 EVPLQ92817 2033 aa16.39■□□□□ 0.21
MRPL49-201ENST00000279242 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 GP5P40197 560 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 IDH3AP50213 366 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 ABCE1P61221 599 aaKnown RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 PDE1BQ01064 536 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 THEMIS2Q5TEJ8 643 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 AP1ARQ63HQ0 302 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 NCBP2-AS2Q69YL0 99 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 ZCCHC23Q6ZST2 131 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 PDSS2Q86YH6 399 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 C12orf29Q8N999 325 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 OR6Y1Q8NGX8 325 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 ZNF778Q96MU6 729 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 TTC1Q99614 292 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 USP3Q9Y6I4 520 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 A0A087WZ62 844 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 ARHGAP42A6NI28 874 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 TMEM114B3SHH9 223 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 PIK3R2O00459 728 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 SNUPNO95149 360 aaKnown RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 BAG2O95816 211 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 RALBP11234 206 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 MAGEA12P43365 314 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 BCAT1P54687 386 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 MDH1BQ5I0G3 518 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 COLGALT1Q8NBJ5 622 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 KIF12Q96FN5 646 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 CLPTM1LQ96KA5 538 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 HSFY1Q96LI6 401 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 KCTD15Q96SI1 283 aaPredicted RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 FDXACB1Q9BRP7 624 aaPredicted RBP16.38■□□□□ 0.21
MRPL49-201ENST00000279242 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 GGA3Q9NZ52 723 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 PPM1HQ9ULR3 514 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 SLC4A7Q9Y6M7 1214 aa16.38■□□□□ 0.21
MRPL49-201ENST00000279242 RALGAPA2Q2PPJ7 1873 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms