RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 HLA-DRAP01903 254 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ETS1P14921 441 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 SSTR1P30872 391 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ZNF252P-AS1Q0IIN9 211 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 DMP1Q13316 513 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 MSS51Q4VC12 460 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TTC39BQ5VTQ0 682 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ZNF410Q86VK4 478 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 PALM2Q8IXS6 379 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 RBM15BQ8NDT2 890 aaKnown RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 FBXO36Q8NEA4 188 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 DTX3LQ8TDB6 740 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 PRR11Q96HE9 360 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TUBGCP5Q96RT8 1024 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 S100A14Q9HCY8 104 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 MSRAQ9UJ68 235 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 CHD9Q3L8U1 2897 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 SGK1O00141 431 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 GPR182O15218 404 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 KRT10P13645 584 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 UQCRBP14927 111 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 BGNP21810 368 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 GNA15P30679 374 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 CDC42EP1Q00587 391 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 HSF5Q4G112 596 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TEX44Q53QW1 395 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ARCQ7LC44 396 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TREML1Q86YW5 311 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 ANKMY2Q8IV38 441 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 DEFB123Q8N688 67 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 OR6Y1Q8NGX8 325 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 FNIP1Q8TF40 1166 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 NAT14Q8WUY8 206 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 MTBPQ96DY7 904 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 SERAC1Q96JX3 654 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 FAM118BQ9BPY3 351 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 FTHL17Q9BXU8 183 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 GCOM2Q9BZD3 368 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 POLR3FQ9H1D9 316 aaPredicted RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 FAM96AQ9H5X1 160 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 METTL5Q9NRN9 209 aaKnown RBP10.66□□□□□ -0.7
UPF3B-201ENST00000276201 PLK2Q9NYY3 685 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 SLC7A8Q9UHI5 535 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 PLLPQ9Y342 182 aa10.66□□□□□ -0.7
UPF3B-201ENST00000276201 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 C1QAP02745 245 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 CA3P07451 260 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 SRGAP2CP0DJJ0 459 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 RPL22P35268 128 aaKnown RBP10.65□□□□□ -0.7
UPF3B-201ENST00000276201 ARL2P36404 184 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 CPOXP36551 454 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 DSC3Q14574 896 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 EFTUD2Q15029 972 aaKnown RBP eCLIP10.65□□□□□ -0.71e-7■■■■□ 23.5
UPF3B-201ENST00000276201 SH2D4BQ5SQS7 431 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 ZNF697Q5TEC3 545 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 DHDDSQ86SQ9 333 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 TOP1MTQ969P6 601 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 PPP1R14BQ96C90 147 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 IFT122Q9HBG6 1241 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 KMT5AQ9NQR1 393 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 TEX264Q9Y6I9 313 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 TTC3P53804 2025 aa10.65□□□□□ -0.7
UPF3B-201ENST00000276201 WDR91A4D1P6 747 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 LCHNA4D1U4 455 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 TLL1O43897 1013 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 PIGRP01833 764 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 KRT7P08729 469 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 WEE2P0C1S8 567 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 UBTFL6P0CB48 400 aaPredicted RBP10.65□□□□□ -0.71
UPF3B-201ENST00000276201 MYL4P12829 197 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 ATF7P17544 494 aaPredicted RBP10.65□□□□□ -0.71
UPF3B-201ENST00000276201 CAPSQ13938 189 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 LGSNQ5TDP6 509 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 ANKRD22Q5VYY1 191 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 LLGL2Q6P1M3 1020 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 PGM2L1Q6PCE3 622 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 TTC7BQ86TV6 843 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 SLC26A11Q86WA9 606 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 TMEM126BQ8IUX1 230 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 POMGNT1Q8WZA1 660 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 FAM111AQ96PZ2 611 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 RAD9AQ99638 391 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 ADAM2Q99965 735 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 PTTG2Q9NZH5 202 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 ITGA11Q9UKX5 1188 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 SOX13Q9UN79 622 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 USTQ9Y2C2 406 aa10.65□□□□□ -0.71
UPF3B-201ENST00000276201 COL4A6Q14031 1691 aa10.64□□□□□ -0.71
UPF3B-201ENST00000276201 A0A088AWK7 358 aa10.64□□□□□ -0.71
UPF3B-201ENST00000276201 SDR42E2A6NKP2 422 aa10.64□□□□□ -0.71
UPF3B-201ENST00000276201 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
UPF3B-201ENST00000276201 H3BRJ5 948 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms