RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 DHPSP49366 369 aaPredicted RBP15□□□□□ -0.01
HMGN3-201ENST00000275036 LIMK1P53667 647 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 STX1AQ16623 288 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 PTPN20Q4JDL3 420 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 CCDC183Q5T5S1 534 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 NUGGCQ68CJ6 796 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 RNF43Q68DV7 783 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 SMYD5Q6GMV2 418 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 SASS6Q6UVJ0 657 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 ANKS1BQ7Z6G8 1248 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 UNC45BQ8IWX7 931 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 SORCS1Q8WY21 1168 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 TMA16Q96EY4 203 aaKnown RBP15□□□□□ -0.01
HMGN3-201ENST00000275036 SERPINB11Q96P15 392 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 SLC2A11Q9BYW1 496 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 GANQ9H2C0 597 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 HSD3B7Q9H2F3 369 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 POPDC2Q9HBU9 364 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 TMEM74BQ9NUR3 256 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 ANO10Q9NW15 660 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 XPO7Q9UIA9 1087 aaKnown RBP15□□□□□ -0.01
HMGN3-201ENST00000275036 TLR6Q9Y2C9 796 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 STON1Q9Y6Q2 735 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 NUMA1Q14980 2115 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 IGHV1OR15-9A0A0B4J2B8 117 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 EPHB6O15197 1021 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 IRAK2O43187 625 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 FOXD2O60548 495 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-201ENST00000275036 CYP11B1P15538 503 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 HLA-FP30511 346 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 KRT9P35527 623 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 YWHAZP63104 245 aaKnown RBP14.99□□□□□ -0.01
HMGN3-201ENST00000275036 NNTQ13423 1086 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 EIF4EBP2Q13542 120 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-201ENST00000275036 ENPP2Q13822 863 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 NCAPHQ15003 741 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 STPG1Q5TH74 334 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 PIK3R6Q5UE93 754 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 OLFML1Q6UWY5 402 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 FAM183BPQ6ZVS7 135 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 CYP2U1Q7Z449 544 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 C11orf74Q86VG3 221 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 DEFB119Q8N690 84 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 DDX1Q92499 740 aaKnown RBP14.99□□□□□ -0.01
HMGN3-201ENST00000275036 AZIN2Q96A70 460 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 MRGPRX1Q96LB2 322 aa14.99□□□□□ -0.01
HMGN3-201ENST00000275036 PRICKLE1Q96MT3 831 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-201ENST00000275036 THAP10Q9P2Z0 257 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-201ENST00000275036 FAM170AA1A519 330 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 F8VZ95 297 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 CAPN9O14815 690 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 TBL1XO60907 577 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 GRAP2O75791 330 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 TRUB2O95900 331 aaKnown RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 MOCS2O96007 188 aaPredicted RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 SLC11A2P49281 568 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 COPB1P53618 953 aaKnown RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 ZNF445P59923 1031 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 MYL5Q02045 173 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 ZNF234Q14588 700 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 FUT11Q495W5 492 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 ZC3H12AQ5D1E8 599 aaKnown RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 PPM1JQ5JR12 505 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 KIAA0907Q7Z7F0 614 aaPredicted RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 DEFB106AQ8N104 65 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 PIGKQ92643 395 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 SPACA7Q96KW9 195 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 SLC2A13Q96QE2 648 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 EDEM2Q9BV94 578 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 STK33Q9BYT3 514 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 MKRN2Q9H000 416 aaKnown RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 NUCKS1Q9H1E3 243 aaKnown RBP14.98□□□□□ -0.01
HMGN3-201ENST00000275036 ELOVL2Q9NXB9 296 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 CYP8B1Q9UNU6 501 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 ADAMTS9Q9P2N4 1935 aa14.98□□□□□ -0.01
HMGN3-201ENST00000275036 ZNF18P17022 549 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 ITPKAP23677 461 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 PRKCHP24723 683 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 CDH5P33151 784 aaPredicted RBP14.97□□□□□ -0.01
HMGN3-201ENST00000275036 BPIFB4P59827 614 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 RPS24P62847 133 aaKnown RBP14.97□□□□□ -0.01
HMGN3-201ENST00000275036 IRX4P78413 519 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 TYRO3Q06418 890 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 DCAF6Q58WW2 860 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 TAF3Q5VWG9 929 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 PEAR1Q5VY43 1037 aaPredicted RBP14.97□□□□□ -0.01
HMGN3-201ENST00000275036 OR6B2Q6IFH4 312 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 SDE2Q6IQ49 451 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 LPCAT2Q7L5N7 544 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 APTXQ7Z2E3 356 aaKnown RBP14.97□□□□□ -0.01
HMGN3-201ENST00000275036 NOP9Q86U38 636 aaKnown RBP14.97□□□□□ -0.01
HMGN3-201ENST00000275036 ADIPOR2Q86V24 386 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 SLC41A1Q8IVJ1 513 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGN3-201ENST00000275036 LMLNQ96KR4 655 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 TRIM62Q9BVG3 475 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 ADAM33Q9BZ11 813 aa14.97□□□□□ -0.01
HMGN3-201ENST00000275036 CIPCQ9C0C6 399 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms