RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PGM3O95394 542 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 SERPINE1P05121 402 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 ATP5BP06576 529 aaKnown RBP28.29■■■□□ 2.12
CBX4-201ENST00000269397 STAG3L1P0CL83 205 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 TBL3Q12788 808 aaKnown RBP28.29■■■□□ 2.12
CBX4-201ENST00000269397 CATSPERGQ6ZRH7 1159 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 TNS4Q8IZW8 715 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 ACTRT2Q8TDY3 377 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 GCNAQ96QF7 691 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 NDNQ99608 321 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 ZDHHC7Q9NXF8 308 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 ITGA11Q9UKX5 1188 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 E9PBE3 544 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 KLHL41O60662 606 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 GLRA3O75311 464 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 CXorf38Q8TB03 319 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 HACL1Q9UJ83 578 aa28.29■■■□□ 2.12
CBX4-201ENST00000269397 GCATO75600 419 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 MGAT1P26572 445 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.28■■■□□ 2.123e-13■■■■□ 21.2
CBX4-201ENST00000269397 ACSS2Q9NR19 701 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 DYNC1I2Q13409 638 aaKnown RBP28.28■■■□□ 2.12
CBX4-201ENST00000269397 STILQ15468 1287 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 OLFML1Q6UWY5 402 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 AEBP2Q6ZN18 517 aaPredicted RBP28.28■■■□□ 2.12
CBX4-201ENST00000269397 CMC1Q7Z7K0 106 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 KHSRPQ92945 711 aaKnown RBP eCLIP28.28■■■□□ 2.12
CBX4-201ENST00000269397 FZD8Q9H461 694 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 AS3MTQ9HBK9 375 aa28.28■■■□□ 2.12
CBX4-201ENST00000269397 SF3B1O75533 1304 aaKnown RBP eCLIP28.28■■■□□ 2.121e-6■■■■■ 30
CBX4-201ENST00000269397 CAPN8A6NHC0 703 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 ZNF195O14628 629 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 TPSB2P20231 275 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 HMGB2P26583 209 aaKnown RBP28.27■■■□□ 2.12
CBX4-201ENST00000269397 PDK3Q15120 406 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 TPSAB1Q15661 275 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 PPP1R26Q5T8A7 1209 aaPredicted RBP28.27■■■□□ 2.12
CBX4-201ENST00000269397 HEATR6Q6AI08 1181 aaKnown RBP28.27■■■□□ 2.12
CBX4-201ENST00000269397 ATP2A3Q93084 1043 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 PGBD4Q96DM1 585 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 MOCOSQ96EN8 888 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 LGMNQ99538 433 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 LPIN3Q9BQK8 851 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 CLIC5Q9NZA1 410 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 ZBTB14O43829 449 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 ITGA2BP08514 1039 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 CPB2Q96IY4 423 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 PPP1R36Q96LQ0 422 aa28.27■■■□□ 2.12
CBX4-201ENST00000269397 BARX2Q9UMQ3 279 aaPredicted RBP28.27■■■□□ 2.12
CBX4-201ENST00000269397 ERVK-10P10266 1014 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 RALBP11234 206 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 GTF2A2P52657 109 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 CLEC4CQ8WTT0 213 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 NCSTNQ92542 709 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 NMD3Q96D46 503 aaKnown RBP28.26■■■□□ 2.12
CBX4-201ENST00000269397 CMTM5Q96DZ9 223 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 ZNF670Q9BS34 389 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 C2orf40Q9H1Z8 148 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 TBC1D30Q9Y2I9 924 aa28.26■■■□□ 2.12
CBX4-201ENST00000269397 IL18RAPO95256 599 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 ARIH2O95376 493 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 VAV1P15498 845 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 NIPAL4Q0D2K0 466 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 LCLAT1Q6UWP7 414 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 DNERQ8NFT8 737 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 OLFM3Q96PB7 478 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 SIKE1Q9BRV8 207 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 PDGFDQ9GZP0 370 aaPredicted RBP28.26■■■□□ 2.11
CBX4-201ENST00000269397 COPG2Q9UBF2 871 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 INPP5FQ9Y2H2 1132 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 H3BNX3 289 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 TYK2P29597 1187 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 MLH1P40692 756 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 ABCE1P61221 599 aaKnown RBP28.26■■■□□ 2.11
CBX4-201ENST00000269397 OLIG2Q13516 323 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 PYROXD2Q8N2H3 581 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 NAT14Q8WUY8 206 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 VCX3BQ9H321 246 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 VCX3AQ9NNX9 186 aa28.26■■■□□ 2.11
CBX4-201ENST00000269397 MSX2P35548 267 aaPredicted RBP28.25■■■□□ 2.11
CBX4-201ENST00000269397 FOLH1Q04609 750 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 MBTD1Q05BQ5 628 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 ACOT1Q86TX2 421 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 TTC30AQ86WT1 665 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 NCAPG2Q86XI2 1143 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 FBXW8Q8N3Y1 598 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 G3BP2Q9UN86 482 aaKnown RBP28.25■■■□□ 2.11
CBX4-201ENST00000269397 GABBR2O75899 941 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 CNTFP26441 200 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 ABCG1P45844 678 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 BTKQ06187 659 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 SEMA5AQ13591 1074 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 SLC5A9Q2M3M2 681 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 ARHGAP22Q7Z5H3 698 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 ZNF781Q8N8C0 355 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 B4GALNT2Q8NHY0 566 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 EZH1Q92800 747 aaPredicted RBP28.25■■■□□ 2.11
CBX4-201ENST00000269397 COG4Q9H9E3 785 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 DNAJC28Q9NX36 388 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 DCDC2Q9UHG0 476 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms