RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 SEPT10Q9P0V9 454 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 MYO18AQ92614 2054 aaKnown RBP13.3□□□□□ -0.28
CPSF6-201ENST00000266679 A0A0A0MRY4 1105 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 FAM159BA6NKW6 160 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 CYB561D2O14569 222 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 RFPL1O75677 317 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 DGKIO75912 1065 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 GSTA2P09210 222 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 IGFBP6P24592 240 aaPredicted RBP13.3□□□□□ -0.28
CPSF6-201ENST00000266679 CCNFP41002 786 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 NDUFV1P49821 464 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 ARFIP2P53365 341 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 LILRA4P59901 499 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 ADAM17P78536 824 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 CRADDP78560 199 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 AP1B1Q10567 949 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 IRF5Q13568 498 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 ACCSLQ4AC99 568 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 XKR4Q5GH76 650 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 MDH1BQ5I0G3 518 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 TWF2Q6IBS0 349 aaKnown RBP13.3□□□□□ -0.28
CPSF6-201ENST00000266679 LIMS2Q7Z4I7 341 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 ARMC2Q8NEN0 867 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 RNF139Q8WU17 664 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 TRIB2Q92519 343 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 SPATA13Q96N96 652 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 DUSP16Q9BY84 665 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
CPSF6-201ENST00000266679 SLC17A6Q9P2U8 582 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 LAMA2P24043 3122 aaKnown RBP13.3□□□□□ -0.28
CPSF6-201ENST00000266679 TSC2P49815 1807 aa13.3□□□□□ -0.28
CPSF6-201ENST00000266679 C2orf71A6NGG8 1288 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 H3BRJ5 948 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 RNF103O00237 685 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 CREB3O43889 395 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 KRT38O76015 456 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 GJA8P48165 433 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 SLC8A3P57103 927 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 MRPS5P82675 430 aaKnown RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 NME3Q13232 169 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 CCL14Q16627 93 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 MROH9Q5TGP6 573 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 BSPRYQ5W0U4 402 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 WSCD1Q658N2 575 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 CASC4Q6P4E1 433 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 CLNKQ7Z7G1 428 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 LONP2Q86WA8 852 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 UNC5BQ8IZJ1 945 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 COLGALT1Q8NBJ5 622 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 INPP5DQ92835 1189 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 SLC7A6OSQ96CW6 309 aaPredicted RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 ZFP42Q96MM3 310 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 HNRNPABQ99729 332 aaKnown RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 GTF2IRD1Q9UHL9 959 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 MCM8Q9UJA3 840 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 HACD1B0YJ81 288 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 M0QYT0 321 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PTGESO14684 152 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 ZNF865P0CJ78 1059 aaPredicted RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 NPR3P17342 541 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 EPHB2P29323 1055 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 HFE2Q6ZVN8 426 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 SIX6OS1Q8N1H7 587 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 TOP6BLQ8N6T0 577 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PDCD7Q8N8D1 485 aaKnown RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PRR11Q96HE9 360 aaPredicted RBP13.29□□□□□ -0.28
CPSF6-201ENST00000266679 LRRC4Q9HBW1 653 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PLLPQ9Y342 182 aa13.29□□□□□ -0.28
CPSF6-201ENST00000266679 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 HAS3O00219 553 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 HAUS5O94927 633 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 FDFT1P37268 417 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 MAP3K7CLP57077 242 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 SESN2P58004 480 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 SARNPP82979 210 aaKnown RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 ZBTB16Q05516 673 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 MORN1Q5T089 497 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 SYPL2Q5VXT5 272 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 PAQR9Q6ZVX9 377 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 NME8Q8N427 588 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 CCNYQ8ND76 341 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 RCOR3Q9P2K3 495 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 HMX2A2RU54 273 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 I3L4J1 428 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 STK10O94804 968 aaKnown RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 TOP3BO95985 862 aaKnown RBP13.28□□□□□ -0.28
CPSF6-201ENST00000266679 RARBP10826 455 aa13.28□□□□□ -0.28
CPSF6-201ENST00000266679 MGAT1P26572 445 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms