RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 RAB33AQ14088 237 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 TAF12Q16514 161 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 C10orf120Q5SQS8 335 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 CFAP58Q5T655 872 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 BZW1Q7L1Q6 419 aaKnown RBP8.58□□□□□ -1.04
COPS4-201ENST00000264389 UNC45BQ8IWX7 931 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 KRT222Q8N1A0 295 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
COPS4-201ENST00000264389 QKIQ96PU8 341 aaKnown RBP eCLIP8.58□□□□□ -1.043e-7■■■■□ 24.8
COPS4-201ENST00000264389 CDK5RAP1Q96SZ6 601 aaKnown RBP8.58□□□□□ -1.04
COPS4-201ENST00000264389 LBHD1Q9BQE6 289 aaPredicted RBP8.58□□□□□ -1.04
COPS4-201ENST00000264389 TTLL2Q9BWV7 592 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 ETNK2Q9NVF9 386 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS4-201ENST00000264389 FNIP2Q9P278 1114 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 OR12D3Q9UGF7 316 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 ANAPC5Q9UJX4 755 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 ZMYND8Q9ULU4 1186 aaPredicted RBP8.58□□□□□ -1.04
COPS4-201ENST00000264389 TLR6Q9Y2C9 796 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 ATP8A1Q9Y2Q0 1164 aa8.58□□□□□ -1.04
COPS4-201ENST00000264389 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 BCLAF3A2AJT9 711 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 FAM72CH0Y354 149 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PPP1R12AO14974 1030 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 DCLK1O15075 740 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 KCNN4O15554 427 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PPFIA2O75334 1257 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PAGE1O75459 146 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 LINC00271P0C7V0 271 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 CTSAP10619 480 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 SLC2A3P11169 496 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 ERCC2P18074 760 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 STIP1P31948 543 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 CTNNB1P35222 781 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HCAR3P49019 387 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 BASP1P80723 227 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 PLD1Q13393 1074 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 EIF4EBP2Q13542 120 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 SLMAPQ14BN4 828 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HSP90B2PQ58FF3 399 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 SLC45A4Q5BKX6 768 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FAM72AQ5TYM5 149 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FAM72DQ6L9T8 149 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HIBCHQ6NVY1 386 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 RHBDF2Q6PJF5 856 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PDZD4Q76G19 769 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 B4GALNT4Q76KP1 1039 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PCGF5Q86SE9 256 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 TADA2BQ86TJ2 420 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 CCDC25Q86WR0 208 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FAM72BQ86X60 149 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 MIB1Q86YT6 1006 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 GPR65Q8IYL9 337 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FAM71DQ8N9W8 422 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 KLHL23Q8NBE8 558 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PHOSPHO2Q8TCD6 241 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 OVCA2Q8WZ82 227 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 ZNF512Q96ME7 567 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 OLFM3Q96PB7 478 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HAPLN3Q96S86 360 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 RAD9AQ99638 391 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 DTLQ9NZJ0 730 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 TPX2Q9ULW0 747 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 MFHAS1Q9Y4C4 1052 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 INSL5Q9Y5Q6 135 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 SNX10Q9Y5X0 201 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HACD1B0YJ81 288 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 TEX28O15482 410 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FGF10O15520 208 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 TLR5O60602 858 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 LRIG2O94898 1065 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 ZDHHC11BP0C7U3 371 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 RBL1P28749 1068 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 EPHB2P29323 1055 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HTR7P34969 479 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HSD17B3P37058 310 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PMS2P54278 862 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 TWF1Q12792 350 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 MORF4L2Q15014 288 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PAFAH1B3Q15102 231 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 SPDYCQ5MJ68 293 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 RASIP1Q5U651 963 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 ALS2CLQ60I27 953 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 HEATR6Q6AI08 1181 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 RWDD4Q6NW29 188 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 CEP128Q6ZU80 1094 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 CCDC33Q8N5R6 958 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 PDCD7Q8N8D1 485 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 ATP6V0D2Q8N8Y2 350 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 TFB1MQ8WVM0 346 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 TBC1D31Q96DN5 1066 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FCRL2Q96LA5 508 aaPredicted RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 ZIM3Q96PE6 472 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 FERMT1Q9BQL6 677 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 UBE2OQ9C0C9 1292 aaKnown RBP8.57□□□□□ -1.04
COPS4-201ENST00000264389 NACA2Q9H009 215 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 SIK2Q9H0K1 926 aa8.57□□□□□ -1.04
COPS4-201ENST00000264389 TSPYL1Q9H0U9 437 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms