RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 RTN4RL1Q86UN2 441 aaPredicted RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 KRT222Q8N1A0 295 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 PPHLN1Q8NEY8 458 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 VPS39Q96JC1 886 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ZNF670Q9BS34 389 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 FOXP3Q9BZS1 431 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 LMAN2LQ9H0V9 348 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CLIC5Q9NZA1 410 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 AAR2Q9Y312 384 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CCDC195A0A1B0GUA6 201 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 A0A1W2PRU2 124 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 ESYT3A0FGR9 886 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 HACD1B0YJ81 288 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 INPPL1O15357 1258 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 PMPCBO75439 489 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 HPDP32754 393 aaPredicted RBP8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 DSG1Q02413 1049 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 ALKAL1Q6UXT8 129 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 SDCCAG8Q86SQ7 713 aaPredicted RBP8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 TAC4Q86UU9 113 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 TMEM139Q8IV31 216 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 CCDC33Q8N5R6 958 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 OR10T2Q8NGX3 314 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 DEPDC1BQ8WUY9 529 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 HERVK_113Q902F9 699 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 RNF157Q96PX1 679 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 TRIM51Q9BSJ1 452 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 FRMD8Q9BZ67 464 aaPredicted RBP8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 NT5MQ9NPB1 228 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 SCML2Q9UQR0 700 aa8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 REXO2Q9Y3B8 237 aaKnown RBP8.52□□□□□ -1.04
GTF3C3-201ENST00000263956 EXOC1LA0A1B0GW35 172 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 C2CD4BA6NLJ0 364 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 APOC4-APOC2K7ER74 178 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ENDOD1O94919 500 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 NFATC1O95644 943 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 APOC2P02655 101 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ITGB1P05556 798 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 HNRNPA1P09651 372 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 FSHRP23945 695 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 DDX6P26196 483 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 GGCXP38435 758 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 PAPOLAP51003 745 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 VCPP55072 806 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 MPPE1Q53F39 396 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ANKRD20A8PQ5CZ79 823 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 PSTKQ8IV42 348 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ATP11CQ8NB49 1132 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 FAM76AQ8TAV0 307 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 PLD4Q96BZ4 506 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 NUDCD1Q96RS6 583 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 TMEM209Q96SK2 561 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 NSRP1Q9H0G5 558 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ZFP14Q9HCL3 533 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 UBA2Q9UBT2 640 aaPredicted RBP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ZNF263O14978 683 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ACSL4O60488 711 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ACSL3O95573 720 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 FGFR3P22607 806 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 CYP4F8P98187 520 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 TAF5Q15542 800 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ATP13A4Q4VNC1 1196 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 RFX8Q6ZV50 586 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 RAPH1Q70E73 1250 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 MMGT1Q8N4V1 131 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 RAPGEF5Q92565 580 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ERP44Q9BS26 406 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 MOSPD1Q9UJG1 213 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 TLK1Q9UKI8 766 aa8.52□□□□□ -1.05
GTF3C3-201ENST00000263956 ERCC2P18074 760 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 ZNF132P52740 706 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 TAS2R40P59535 323 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 DSC1Q08554 894 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 ZBED8Q8IZ13 594 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 CPA6Q8N4T0 437 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 SLC25A41Q8N5S1 370 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 KBTBD7Q8WVZ9 684 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 KLHL5Q96PQ7 755 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 VAT1Q99536 393 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 SEPT3Q9UH03 358 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 XPO7Q9UIA9 1087 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 TRHDEQ9UKU6 1024 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 MYH11P35749 1972 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 TRPM7Q96QT4 1865 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 TARSL2A2RTX5 802 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 TULP2O00295 520 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 TRDMT1O14717 391 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 RAD51CO43502 376 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 CLDN11O75508 207 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 HTR7P34969 479 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 GPR15P49685 360 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 SCYL1Q96KG9 808 aa8.51□□□□□ -1.05
GTF3C3-201ENST00000263956 C17orf80Q9BSJ5 609 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms