RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 PYDC2Q56P42 97 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 LPCAT1Q8NF37 534 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 CRYL1Q9Y2S2 319 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ADSLP30566 484 aaPredicted RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ZNF846Q147U1 533 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 TPBGLP0DKB5 382 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 UCHL3P15374 230 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 PRKAG1P54619 331 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ANGEL2Q5VTE6 544 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 CDADC1Q9BWV3 514 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 RBM12Q9NTZ6 932 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 FAM92AA1XBS5 289 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 SMAPO00193 183 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ATP9AO75110 1047 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 SNX4O95219 450 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 THOP1P52888 689 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 HUNKP57058 714 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ADRM1Q16186 407 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 GPAT3Q53EU6 434 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 TNKS2Q9H2K2 1166 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 SPG21Q9NZD8 308 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 VANGL2Q9ULK5 521 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 PCDHB2Q9Y5E7 798 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 CNTNAP2Q9UHC6 1331 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 ATP7AQ04656 1500 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 KPNA4O00629 521 aaPredicted RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 DRG1Q9Y295 367 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 WBP11Q9Y2W2 641 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 NTSP30990 170 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 POU6F1Q14863 301 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 DET1Q7L5Y6 550 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 TMC7Q7Z402 723 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 MPP4Q96JB8 637 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 KCNS3Q9BQ31 491 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 CASTOR2A6NHX0 329 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 PDX1P52945 283 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 BTN3A2P78410 334 aa11.63□□□□□ -0.55
PTPN4-201ENST00000263708 MAD2L1Q13257 205 aaPredicted RBP11.63□□□□□ -0.55
PTPN4-201ENST00000263708 H7C1W4 665 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 RHOBTB3O94955 611 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 CHRNA5P30532 468 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 TFAP2DQ7Z6R9 452 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 ZCCHC7Q8N3Z6 543 aaKnown RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 A1CFQ9NQ94 594 aaKnown RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 MAFFQ9ULX9 164 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 OR10H1Q9Y4A9 318 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 NUP153P49790 1475 aaKnown RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 FASP25445 335 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 KBTBD7Q8WVZ9 684 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 CCDC182A6NF36 153 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 ABATP80404 500 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 TFDP3Q5H9I0 405 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 GLT6D1Q7Z4J2 308 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 GTF3C2Q8WUA4 911 aaPredicted RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 ZBTB10Q96DT7 871 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 DSEQ9UL01 958 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 DNAJC16Q9Y2G8 782 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 A0A087WZ62 844 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 A0A0G2JLW4 131 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 A0A0X1KG70 313 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 AQP5P55064 265 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 RPL10AP62906 217 aaKnown RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 SUZ12Q15022 739 aaKnown RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 TBC1D25Q3MII6 688 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 GALNTL5Q7Z4T8 443 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 SAMD3Q8N6K7 520 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 OR2L5Q8NG80 312 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 WDR24Q96S15 920 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 HBP1O60381 514 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 EPN2O95208 641 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 RBP1P09455 135 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 EPORP19235 508 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 TCF7P36402 384 aaPredicted RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 SLC29A2Q14542 456 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 ZMYND11Q15326 602 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 C11orf63Q6NUN7 778 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 RERGQ96A58 199 aaPredicted RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 MNTQ99583 582 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 EPB41L4AQ9HCS5 686 aaPredicted RBP11.62□□□□□ -0.55
PTPN4-201ENST00000263708 GSTK1Q9Y2Q3 226 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 ZNF879B4DU55 563 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 S100A6P06703 90 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 CRATP43155 626 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 TRAPPC5Q8IUR0 188 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 MTMR12Q9C0I1 747 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 VTNP04004 478 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 PKN1Q16512 942 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 DGUOKQ16854 277 aa11.62□□□□□ -0.55
PTPN4-201ENST00000263708 FBXO36Q8NEA4 188 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms