RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ETNK2Q9NVF9 386 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 DZANK1Q9NVP4 752 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 LMCD1Q9NZU5 365 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CWC15Q9P013 229 aaKnown RBP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CCL26Q9Y258 94 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 MRPS23Q9Y3D9 190 aaKnown RBP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 NUP205Q92621 2012 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 TMEM265A0A087WTH1 108 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 TRAV19A0A0A6YYK7 116 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 TRDMT1O14717 391 aaKnown RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 CKMP06732 381 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 LTBRP36941 435 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 SCAPQ12770 1279 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 ANKRD20A8PQ5CZ79 823 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 BRMS1LQ5PSV4 323 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 ARTNQ5T4W7 220 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 CCDC181Q5TID7 509 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 RAP1GAP2Q684P5 730 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 NADSYN1Q6IA69 706 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 KLHDC10Q6PID8 442 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 NPNTQ6UXI9 565 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 GPR149Q86SP6 731 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 SLC13A5Q86YT5 568 aaPredicted RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 RFX6Q8HWS3 928 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 PQLC3Q8N755 202 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 PCDH19Q8TAB3 1148 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 ACTRT1Q8TDG2 376 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 MYLIPQ8WY64 445 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 TSC1Q92574 1164 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 HAUS1Q96CS2 278 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 MYEOVQ96EZ4 313 aa10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 RBM41Q96IZ5 413 aaKnown RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 SAE1Q9UBE0 346 aaPredicted RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 R3HDM2Q9Y2K5 976 aaKnown RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 HBS1LQ9Y450 684 aaKnown RBP10.08□□□□□ -0.8
SNRNP40-201ENST00000263694 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 MYOFQ9NZM1 2061 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 SPTBN5Q9NRC6 3674 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 PGRMC1O00264 195 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CES2O00748 559 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CST8O60676 142 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 LRIG2O94898 1065 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 OLFM2O95897 454 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 APOEP02649 317 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 POU2F2P09086 479 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 POU3F3P20264 500 aaPredicted RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CORO1AP31146 461 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 PAFAH1B1P43034 410 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 IRAK1P51617 712 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 MRPS25P82663 173 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 COG7P83436 770 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 C2orf54Q08AI8 447 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 SEMA3BQ13214 749 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 NNTQ13423 1086 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 PDK2Q15119 407 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 SIX1Q15475 284 aaPredicted RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 TAZQ16635 292 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 WHAMMP3Q1A5X7 153 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CTC1Q2NKJ3 1217 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 ARHGAP15Q53QZ3 475 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 TFDP3Q5H9I0 405 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 MS4A13Q5J8X5 152 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 FAM182AQ5T1J6 154 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 RFWD3Q6PCD5 774 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 B4GALNT4Q76KP1 1039 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CMTM8Q8IZV2 173 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CCDC33Q8N5R6 958 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 PPM1EQ8WY54 764 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CSPG4P5Q96PW8 444 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 RNF157Q96PX1 679 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 S1PR5Q9H228 398 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 ADAM7Q9H2U9 754 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 TASP1Q9H6P5 420 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 CFAP97Q9P2B7 532 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 DOCK4Q8N1I0 1966 aa10.07□□□□□ -0.8
SNRNP40-201ENST00000263694 DOCK8Q8NF50 2099 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 LEFTY2O00292 366 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 EEF2KO00418 725 aaKnown RBP10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 KRIT1O00522 736 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 GREM1O60565 184 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 TSPAN3O60637 253 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 PAPLNO95428 1278 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 FGF19O95750 216 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 SLC2A3P11169 496 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 FSHRP23945 695 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 SLC6A4P31645 630 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 AVPR1AP37288 418 aa10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
SNRNP40-201ENST00000263694 MLLT6P55198 1093 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms