RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 LINC00523Q86TU6 105 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 ACOX2Q99424 681 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PPIEQ9UNP9 301 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 OR6B1O95007 311 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 FXR1P51114 621 aaKnown RBP eCLIP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 CNTN2Q02246 1040 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PALB2Q86YC2 1186 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SIK3Q9Y2K2 1263 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 RPS6KL1Q9Y6S9 549 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 GLTPD2A6NH11 291 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 RAD51BO15315 384 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 FCGR1AP12314 374 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SLC2A4P14672 509 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 HALP42357 657 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 HK2P52789 917 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 AMPD2Q01433 879 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PMF1Q6P1K2 205 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 ZFPM1Q8IX07 1006 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 ZSCAN18Q8TBC5 510 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 CHID1Q9BWS9 393 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 AGLP35573 1532 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 ITGB3P05106 788 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 NDUFV1P49821 464 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 MFSD10Q14728 455 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 TMEM138Q9NPI0 162 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 EVA1BQ9NVM1 165 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 FGFR3P22607 806 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 IKBKEQ14164 716 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 STILQ15468 1287 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 PEG10Q86TG7 708 aaKnown RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 SLC13A5Q86YT5 568 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 MYO1HQ8N1T3 1032 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 SEMA4DQ92854 862 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 UBE2OQ9C0C9 1292 aaKnown RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ALG6Q9Y672 507 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 LAMC1P11047 1609 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 EGFRP00533 1210 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 PPATQ06203 517 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 TNS4Q8IZW8 715 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 FEZF2Q8TBJ5 459 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 S100A13Q99584 98 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 HOXA2O43364 376 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 KATNA1O75449 491 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 UBOX5O94941 541 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ODC1P11926 461 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 RFC5P40937 340 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 INHBEP58166 350 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 PTSQ03393 145 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 OLFML2AQ68BL7 652 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 GPRC5CQ9NQ84 441 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 MIEF1Q9NQG6 463 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 LOC100506127A0A0U1RQW1 187 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ATP2C1P98194 919 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 TAF13Q15543 124 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 RGL4Q8IZJ4 473 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ANKRD7Q92527 254 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 INPP4BO15327 924 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 TLL1O43897 1013 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ENO2P09104 434 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 CASP4P49662 377 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
TTC39A-202ENST00000262676 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 WBP11Q9Y2W2 641 aaKnown RBP13.15□□□□□ -0.3
TTC39A-202ENST00000262676 PNMA8CA0A1B0GUJ8 204 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 CHURC1-FNTBB4DL54 471 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 CLOCKO15516 846 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 VCLP18206 1134 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 PCSK1P29120 753 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 FDFT1P37268 417 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 CSHL1Q14406 222 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 ZCCHC8Q6NZY4 707 aaKnown RBP13.14□□□□□ -0.31
TTC39A-202ENST00000262676 MED8Q96G25 268 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 RABGEF1Q9UJ41 708 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 TIMM44O43615 452 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 FKBP6O75344 327 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 ANXA9O76027 345 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 GRK4P32298 578 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 MAPK9P45984 424 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 FLT3LGP49771 235 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 CCNG1P51959 295 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 PLCL1Q15111 1095 aa13.14□□□□□ -0.31
TTC39A-202ENST00000262676 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms